RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
SEC13-215ENST00000477547 COMMD4Q9H0A8 199 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 BABAM2Q9NXR7 383 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 TAAR3PQ9P1P4 343 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 TRBV2A0A0J9YWF9 115 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 PNMA8CA0A1B0GUJ8 204 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 PLSCR5A0PG75 271 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 TRIM64A6NGJ6 449 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 TMEM212A6NML5 194 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 IQCF6A8MYZ5 107 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 H3BSH0 61 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 IGLV3-1P01715 115 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 CD99P14209 185 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 ALDH3B1P43353 468 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 EVX1P49640 407 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 FAM3AP98173 230 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 OR8B8Q15620 311 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 CCDC58Q4VC31 144 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 RPL22L1Q6P5R6 122 aaKnown RBP13.1□□□□□ -0.31
SEC13-215ENST00000477547 ZNF367Q7RTV3 350 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 SMIM19Q96E16 107 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 SOX7Q9BT81 388 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 TMUB1Q9BVT8 246 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 LIME1Q9H400 295 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 ZNF696Q9H7X3 374 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 ACOT13Q9NPJ3 140 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
SEC13-215ENST00000477547 GPR160Q9UJ42 338 aa13.1□□□□□ -0.31
SEC13-215ENST00000477547 CD300LBA8K4G0 201 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 DHRS3O75911 302 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 ZFPL1O95159 310 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 CD8AP01732 235 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 RAF1P04049 648 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 ACHEP22303 614 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 CCL1P22362 96 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 GSK3AP49840 483 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 BDH1Q02338 343 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 MOGQ16653 247 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 SWI5Q1ZZU3 235 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 MST1LQ2TV78 715 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 ZMAT1Q5H9K5 638 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 DOK3Q7L591 496 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 SPARTQ8N0X7 666 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 OR5AK2Q8NH90 309 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 RPS4Y2Q8TD47 263 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 GTF3AQ92664 365 aaKnown RBP13.09□□□□□ -0.31
SEC13-215ENST00000477547 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
SEC13-215ENST00000477547 PDCD1LG2Q9BQ51 273 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 CACNG6Q9BXT2 260 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 PLEKHA1Q9HB21 404 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 PLEKHA6Q9Y2H5 1048 aa13.09□□□□□ -0.31
SEC13-215ENST00000477547 SIRT4Q9Y6E7 314 aaPredicted RBP13.09□□□□□ -0.31
SEC13-215ENST00000477547 USF3Q68DE3 2245 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 A0A1B0GTI1 187 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 SYT7O43581 403 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 LILRA1O75019 489 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 MTRF1O75570 445 aaKnown RBP13.08□□□□□ -0.32
SEC13-215ENST00000477547 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 BMP4P12644 408 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 ACKR3P25106 362 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 PPOXP50336 477 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
SEC13-215ENST00000477547 SLC3A1Q07837 685 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 TMEM244Q5VVB8 128 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 FCGR1BQ92637 280 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 CXorf56Q9H5V9 222 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 MSL2Q9HCI7 577 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 CYSLTR2Q9NS75 346 aa13.08□□□□□ -0.32
SEC13-215ENST00000477547 PRRC2AP48634 2157 aaKnown RBP13.07□□□□□ -0.32
SEC13-215ENST00000477547 LOC390937A0A1W2PQ73 354 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 OGG1O15527 345 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 ISG15P05161 165 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 NAT2P11245 290 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 ATP6V1B1P15313 513 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 FAHP16930 419 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 CD53P19397 219 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 CELP19835 753 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 CDKN1AP38936 164 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 DDOSTP39656 456 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 MAP2K3P46734 347 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 ZNF81P51508 661 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 MMP15P51511 669 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 ACSM1Q08AH1 577 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 TNK1Q13470 666 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 DMKNQ6E0U4 476 aaPredicted RBP13.07□□□□□ -0.32
SEC13-215ENST00000477547 RDH10Q8IZV5 341 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 FTMTQ8N4E7 242 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 CSNK2A3Q8NEV1 391 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 SEMA6DQ8NFY4 1073 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 TSPAN14Q8NG11 270 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 OR10AC1Q8NH08 325 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 TSEN15Q8WW01 171 aaKnown RBP13.07□□□□□ -0.32
SEC13-215ENST00000477547 IGFBPL1Q8WX77 278 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 RGP1Q92546 391 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms