RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CCR2P41597 374 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 CDK5Q00535 292 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 ALKBH3Q96Q83 286 aaPredicted RBP16.77■□□□□ 0.28
VARS2-209ENST00000477288 GDF2Q9UK05 429 aaPredicted RBP16.77■□□□□ 0.28
VARS2-209ENST00000477288 TRGV10A0A0A0MS01 117 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 GPR31O00270 319 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 RAF1P04049 648 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 GPR3P46089 330 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 DSCR4P56555 118 aaPredicted RBP16.77■□□□□ 0.28
VARS2-209ENST00000477288 KRTDAPP60985 99 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 BTG1P62324 171 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 OR2F1Q13607 317 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 VAMP3Q15836 100 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 ISL2Q96A47 359 aa16.77■□□□□ 0.28
VARS2-209ENST00000477288 YTHDF2Q9Y5A9 579 aaKnown RBP16.77■□□□□ 0.28
VARS2-209ENST00000477288 A0A0A6YYJ9 748 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 ZNF320A2RRD8 509 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 UPK1AO00322 258 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 MBP02144 154 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 GNG10P50151 68 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 ZNF121P58317 390 aaPredicted RBP16.77■□□□□ 0.27
VARS2-209ENST00000477288 PLA1AQ53H76 456 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 OR2Z1Q8NG97 314 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 JAM3Q9BX67 310 aa16.77■□□□□ 0.27
VARS2-209ENST00000477288 SPP1P10451 314 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 ZNF17P17021 662 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 G0S2P27469 103 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 PSMB6P28072 239 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 GPX8Q8TED1 209 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 HES4Q9HCC6 221 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 RCL1Q9Y2P8 373 aaKnown RBP16.76■□□□□ 0.27
VARS2-209ENST00000477288 E5RGE8 158 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 ACOT7LQ6ZUV0 252 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 GALMQ96C23 342 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 CIB3Q96Q77 187 aaPredicted RBP16.76■□□□□ 0.27
VARS2-209ENST00000477288 NSG2Q9Y328 171 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 OR5H8P0DN80 308 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 SLC6A12P48065 614 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 WIPI1Q5MNZ9 446 aaPredicted RBP16.76■□□□□ 0.27
VARS2-209ENST00000477288 OR2A2Q6IF42 318 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 TMPRSS11FQ6ZWK6 438 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 DND1Q8IYX4 353 aaKnown RBP16.76■□□□□ 0.27
VARS2-209ENST00000477288 CA5BP1Q8WTZ4 195 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 PDFQ9HBH1 243 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 DHHO43323 396 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 ICMTO60725 284 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 RD3LP0DJH9 198 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 RRASP10301 218 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 PRSS36Q5K4E3 855 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 OR5AP2Q8NGF4 316 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 POMT2Q9UKY4 750 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 MYH7BA7E2Y1 1941 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 ANKRD36CQ5JPF3 1778 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 UBE2L5PA0A1B0GUS4 154 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 BSGP35613 385 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 DDOSTP39656 456 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 ST8SIA2Q92186 375 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 SLC25A32Q9H2D1 315 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 FZR1Q9UM11 496 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 GLI3P10071 1580 aa16.76■□□□□ 0.27
VARS2-209ENST00000477288 CLEC18AA5D8T8 446 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 TSPAN12O95859 305 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 ZNF26P17031 533 aaPredicted RBP16.75■□□□□ 0.27
VARS2-209ENST00000477288 ARRB2P32121 409 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 CYHR1Q6ZMK1 362 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 CLEC18CQ8NCF0 446 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 C12orf10Q9HB07 376 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 ZNF391Q9UJN7 358 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 COL18A1P39060 1754 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 ZNF83P51522 516 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 CNN1P51911 297 aaKnown RBP16.75■□□□□ 0.27
VARS2-209ENST00000477288 OSR2Q8N2R0 312 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 FBXL6Q8N531 539 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 SPACA9Q96E40 222 aaPredicted RBP16.75■□□□□ 0.27
VARS2-209ENST00000477288 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 SHISA8B8ZZ34 492 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 DHODHQ02127 395 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 FAM53BQ14153 422 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 DHRS7BQ6IAN0 325 aaPredicted RBP16.75■□□□□ 0.27
VARS2-209ENST00000477288 ZBTB25P24278 435 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.75■□□□□ 0.27
VARS2-209ENST00000477288 SIGLEC11Q96RL6 698 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 HDGFL3Q9Y3E1 203 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 CNTRLQ7Z7A1 2325 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 GABRG2P18507 467 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 CABLES2Q9BTV7 478 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 R4GN57 208 aa16.75■□□□□ 0.27
VARS2-209ENST00000477288 TRAV17A0A0B4J275 112 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 A0A1W2PR80 420 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 ANKUB1A6NFN9 424 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 CD3DP04234 171 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 POU3F3P20264 500 aaPredicted RBP16.74■□□□□ 0.27
VARS2-209ENST00000477288 PTBP1P26599 531 aaKnown RBP eCLIP16.74■□□□□ 0.278e-7■■■■□ 21.9
VARS2-209ENST00000477288 LYPD8Q6UX82 237 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 RELL2Q8NC24 303 aaPredicted RBP16.74■□□□□ 0.27
VARS2-209ENST00000477288 MISP3Q96FF7 219 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 POM121L2Q96KW2 1035 aa16.74■□□□□ 0.27
VARS2-209ENST00000477288 ESRP2Q9H6T0 727 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms