RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 HCAR1Q9BXC0 346 aa12.99□□□□□ -0.33
SRRT-209ENST00000474896 GABARAPL3Q9BY60 117 aa12.99□□□□□ -0.33
SRRT-209ENST00000474896 RIBC2Q9H4K1 309 aa12.99□□□□□ -0.33
SRRT-209ENST00000474896 SLC25A19Q9HC21 320 aa12.99□□□□□ -0.33
SRRT-209ENST00000474896 C8orf4Q9NR00 106 aa12.99□□□□□ -0.33
SRRT-209ENST00000474896 BAIAP2Q9UQB8 552 aa12.99□□□□□ -0.33
SRRT-209ENST00000474896 VWFP04275 2813 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 A0A0G2JK05 382 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 CLPSL1A2RUU4 121 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 C22orf46C9J442 243 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 PHYHO14832 338 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 ENSAO43768 121 aaKnown RBP12.98□□□□□ -0.33
SRRT-209ENST00000474896 NDUFA7O95182 113 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 SFTPBP07988 381 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 HIST1H1CP16403 213 aaKnown RBP12.98□□□□□ -0.33
SRRT-209ENST00000474896 EPHA2P29317 976 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 GRK5P34947 590 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 CDKN2AP42771 156 aaKnown RBP12.98□□□□□ -0.33
SRRT-209ENST00000474896 GATA4P43694 442 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 CDK5Q00535 292 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
SRRT-209ENST00000474896 SLC35F1Q5T1Q4 408 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 TMEM236Q5W0B7 351 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 PTCHD4Q6ZW05 846 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 ADCK1Q86TW2 530 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 PACRGLQ8N7B6 248 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 OR11L1Q8NGX0 322 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 FAM71F1Q96KD3 344 aaPredicted RBP12.98□□□□□ -0.33
SRRT-209ENST00000474896 TSSK2Q96PF2 358 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 CITED1Q99966 193 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 HDHD2Q9H0R4 259 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 LHFPL6Q9Y693 200 aa12.98□□□□□ -0.33
SRRT-209ENST00000474896 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 TNFRSF13BO14836 293 aaPredicted RBP12.97□□□□□ -0.33
SRRT-209ENST00000474896 FAM20BO75063 409 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 MELTFP08582 738 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 POLR2IP36954 125 aaKnown RBP12.97□□□□□ -0.33
SRRT-209ENST00000474896 CFHR2P36980 270 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 PSMB10P40306 273 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 KRTAP10-3P60369 221 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 HOXA4Q00056 320 aaPredicted RBP12.97□□□□□ -0.33
SRRT-209ENST00000474896 ZIK1Q3SY52 487 aaPredicted RBP12.97□□□□□ -0.33
SRRT-209ENST00000474896 COLCA1Q6ZS62 124 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 NAA40Q86UY6 237 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 GALNT4Q8N4A0 578 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 CELF2-AS1Q8N7Q2 184 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 SDR9C7Q8NEX9 313 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 Q8TCH9 128 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 ERGIC1Q969X5 290 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 TECTBQ96PL2 329 aa12.97□□□□□ -0.33
SRRT-209ENST00000474896 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
SRRT-209ENST00000474896 CENPVL3A0A0U1RRI6 287 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 ZNF879B4DU55 563 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 F5H5K5 113 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 M0QZ24 198 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 P2RY10O00398 339 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 DCTN6O00399 190 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 TIMM23O14925 209 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 TOX4O94842 621 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 LIPFP07098 398 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 CRABP1P29762 137 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 NPY4RP50391 375 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRRT-209ENST00000474896 GK2Q14410 553 aaPredicted RBP12.96□□□□□ -0.33
SRRT-209ENST00000474896 MPPED2Q15777 294 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 PRAMEF6Q5VXH4 476 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 SLX4IPQ5VYV7 408 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 CD276Q5ZPR3 534 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 SFRP4Q6FHJ7 346 aaPredicted RBP12.96□□□□□ -0.33
SRRT-209ENST00000474896 RHOUQ7L0Q8 258 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 BOLLQ8N9W6 283 aaKnown RBP12.96□□□□□ -0.33
SRRT-209ENST00000474896 RDH12Q96NR8 316 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 TBX15Q96SF7 602 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 MBOAT4Q96T53 435 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 NMNAT3Q96T66 252 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 TEX12Q9BXU0 123 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 TOR3AQ9H497 397 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 CMC2Q9NRP2 79 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
SRRT-209ENST00000474896 ERVK-18Q9QC07 812 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 B9D1Q9UPM9 204 aa12.96□□□□□ -0.33
SRRT-209ENST00000474896 NOTCH1P46531 2555 aa12.96□□□□□ -0.34
SRRT-209ENST00000474896 CMYA5Q8N3K9 4069 aa12.96□□□□□ -0.34
SRRT-209ENST00000474896 RIIAD1A6NNX1 92 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 DLGAP1O14490 977 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 RENP00797 406 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 IFNGP01579 166 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 LCATP04180 440 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 HMGN1P05114 100 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 ACSM4P0C7M7 580 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 MMP9P14780 707 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 CD200P41217 278 aa12.95□□□□□ -0.34
SRRT-209ENST00000474896 DBPQ10586 325 aaPredicted RBP12.95□□□□□ -0.34
SRRT-209ENST00000474896 CRMP1Q14194 572 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms