RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SNAI3Q3KNW1 292 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 SLC36A3Q495N2 470 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 CYP2R1Q6VVX0 501 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 FGFRL1Q8N441 504 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 ZSCAN4Q8NAM6 433 aaPredicted RBP11.54□□□□□ -0.56
CCDC78-209ENST00000474647 SDR9C7Q8NEX9 313 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 OR4K13Q8NH42 304 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 OR52J3Q8NH60 311 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 SPTSSAQ969W0 71 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 PNRC2Q9NPJ4 139 aaKnown RBP11.54□□□□□ -0.56
CCDC78-209ENST00000474647 DNAJB11Q9UBS4 358 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 VPREB3Q9UKI3 123 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 SAMD4AQ9UPU9 718 aaKnown RBP11.54□□□□□ -0.56
CCDC78-209ENST00000474647 N6AMT1Q9Y5N5 214 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1B0GVI7 797 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1B0GW55 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1W2PRQ8 180 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 TCRBV5S2A0A599 114 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 FCN3O75636 299 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 CIB2O75838 187 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DIRAS1O95057 198 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 ECDO95905 644 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 FBP1P09467 338 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L2P0CJ85 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L3P0CJ86 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L4P0CJ87 422 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L5P0CJ88 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L6P0CJ89 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L7P0CJ90 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 HIST1H1CP16403 213 aaKnown RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 ANOS1P23352 680 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 NOS3P29474 1203 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 SLC6A6P31641 620 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 RPS27P42677 84 aaKnown RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 ZNF92Q03936 586 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 PRB3Q04118 309 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DGCR6Q14129 220 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 RFX4Q33E94 735 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 CDONQ4KMG0 1287 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 GLYATL3Q5SZD4 288 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 TSEN54Q7Z6J9 526 aaKnown RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 GCSAMQ8N6F7 178 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 MAP6Q96JE9 813 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 IFT27Q9BW83 186 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 OR52D1Q9H346 318 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 ZNRD1Q9P1U0 126 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 DUX4Q9UBX2 424 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 CYB5R1Q9UHQ9 305 aa11.53□□□□□ -0.56
CCDC78-209ENST00000474647 RPUSD1Q9UJJ7 312 aaKnown RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 CAB39Q9Y376 341 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-209ENST00000474647 ZNF816-ZNF321PA0A0X1KG74 233 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 ANKRD61A6NGH8 418 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 AQP12BA6NM10 295 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 G3V4G9 280 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 BHLHE40O14503 412 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 PTBP3O95758 552 aaKnown RBP11.52□□□□□ -0.57
CCDC78-209ENST00000474647 ZNF823P16415 610 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 DLX1P56177 255 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 ELF3P78545 371 aaPredicted RBP11.52□□□□□ -0.57
CCDC78-209ENST00000474647 C1orf146Q5VVC0 180 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 AQP12AQ8IXF9 295 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 PLPP7Q8NBV4 271 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 OR56B2PQ8NGI1 322 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 OR8S1Q8NH09 359 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 LRGUKQ96M69 825 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 C16orf95Q9H693 158 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 CNTD2Q9H8S5 307 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 MRPL15Q9P015 296 aaKnown RBP11.52□□□□□ -0.57
CCDC78-209ENST00000474647 KPTNQ9Y664 436 aa11.52□□□□□ -0.57
CCDC78-209ENST00000474647 C5orf63A6NC05 138 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 PAHP00439 452 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 SEMG1P04279 462 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 SLC2A1P11166 492 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 RHCEP18577 417 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 MZT1Q08AG7 82 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 KLRD1Q13241 179 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 PCK2Q16822 640 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 ZBTB46Q86UZ6 589 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 CMTM4Q8IZR5 234 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 FAM216BQ8N7L0 139 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 LRRC29Q8WV35 223 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 CCL13Q99616 98 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 COPS4Q9BT78 406 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 C14orf119Q9NWQ9 140 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 MRPL22Q9NWU5 206 aaKnown RBP11.51□□□□□ -0.57
CCDC78-209ENST00000474647 NDUFAF4Q9P032 175 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 V9GYQ6 96 aa11.51□□□□□ -0.57
CCDC78-209ENST00000474647 TCRBV3S1A0A5B6 114 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 ANKRD65E5RJM6 399 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 NPFFO15130 113 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 PRB2P02812 416 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms