RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TEX29Q8N6K0 151 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 OR52H1Q8NGJ2 320 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 NANPQ8TBE9 248 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 TEAD3Q99594 435 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 SSBP3Q9BWW4 388 aaPredicted RBP15□□□□□ -0.01
UPF3A-203ENST00000474056 OR10A2Q9H208 303 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 FN3KRPQ9HA64 309 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 RNF7Q9UBF6 113 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 MIOXQ9UGB7 285 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 LRP12Q9Y561 859 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 INSIG2Q9Y5U4 225 aa15□□□□□ -0.01
UPF3A-203ENST00000474056 ANKRD30BLA7E2S9 258 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 FSHBP01225 129 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 GRPP07492 148 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 ALOX5APP20292 161 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 ZNF154Q13106 437 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 SCGB2A2Q13296 93 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 LYPD2Q6UXB3 125 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 ZNF826PQ6ZT77 177 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 SPERTQ8NA61 448 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 SEMA6DQ8NFY4 1073 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 NEIL1Q96FI4 390 aaPredicted RBP14.99□□□□□ -0.01
UPF3A-203ENST00000474056 SEMA6AQ9H2E6 1030 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 PPP1R3EQ9H7J1 279 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 OR5V1Q9UGF6 321 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 LAMP5Q9UJQ1 280 aa14.99□□□□□ -0.01
UPF3A-203ENST00000474056 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.98□□□□□ -0.01
UPF3A-203ENST00000474056 A6NLC8 198 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 ZAR1LA6NP61 321 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 PSMD9O00233 223 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 CIB2O75838 187 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 CD80P33681 288 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 GSK3AP49840 483 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 PSMA6P60900 246 aaKnown RBP14.98□□□□□ -0.01
UPF3A-203ENST00000474056 GNB2P62879 340 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 LCN1P1Q5VSP4 162 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 SLX4IPQ5VYV7 408 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 C12orf73Q69YU5 71 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 SFRP4Q6FHJ7 346 aaPredicted RBP14.98□□□□□ -0.01
UPF3A-203ENST00000474056 DCDC5Q6ZRR9 648 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 ASRGL1Q7L266 308 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 KRT77Q7Z794 578 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 WDR86Q86TI4 376 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 ZDHHC13Q8IUH4 622 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 BOLLQ8N9W6 283 aaKnown RBP14.98□□□□□ -0.01
UPF3A-203ENST00000474056 PLPP7Q8NBV4 271 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 OR8B12Q8NGG6 310 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 OR8B3Q8NGG8 313 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 OR8S1Q8NH09 359 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 OR8B2Q96RD0 313 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 TTTY10Q9BZA0 68 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 PRRG3Q9BZD7 231 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 YIPF3Q9GZM5 350 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 C1orf123Q9NWV4 160 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 COPS3Q9UNS2 423 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 AUP1Q9Y679 476 aa14.98□□□□□ -0.01
UPF3A-203ENST00000474056 PRR32B1ATL7 298 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 FCGR1AP12314 374 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 CFL1P23528 166 aaKnown RBP14.97□□□□□ -0.01
UPF3A-203ENST00000474056 CPT2P23786 658 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 PITPNBP48739 271 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 PAX2Q02962 417 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 OR8B8Q15620 311 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 GCSAMQ8N6F7 178 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 TCEANCQ8N8B7 351 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 ZNF418Q8TF45 676 aaPredicted RBP14.97□□□□□ -0.01
UPF3A-203ENST00000474056 LYZL4Q96KX0 146 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 PAPOLGQ9BWT3 736 aaKnown RBP14.97□□□□□ -0.01
UPF3A-203ENST00000474056 RGCCQ9H4X1 137 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 NIPAL2Q9H841 368 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 C14orf119Q9NWQ9 140 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 RHBDD3Q9Y3P4 386 aa14.97□□□□□ -0.01
UPF3A-203ENST00000474056 A0A0A6YYJ9 748 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 hCG_1807616A0A1W2PRN6 198 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 C3orf80F5H4A9 247 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 LGALS8O00214 317 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 EGR1P18146 543 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 ACKR3P25106 362 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 EFNB1P98172 346 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 MZT1Q08AG7 82 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 ARMCX4Q5H9R4 360 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 ZNF841Q6ZN19 808 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 NLRC3Q7RTR2 1065 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 CSNK2A3Q8NEV1 391 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 TMEM163Q8TC26 289 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 C22orf15Q8WYQ4 148 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 DACT3Q96B18 629 aaPredicted RBP14.96□□□□□ -0.01
UPF3A-203ENST00000474056 CIB1Q99828 191 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 SLC6A7Q99884 636 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 MRI1Q9BV20 369 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 CTSZQ9UBR2 303 aa14.96□□□□□ -0.01
UPF3A-203ENST00000474056 IGHV2-70DA0A0C4DH43 119 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 SAC3D1A6NKF1 404 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 PSMB10P40306 273 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 HILS1P60008 231 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 CSNK2BP67870 215 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 PAX8Q06710 450 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 KLF17Q5JT82 389 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 AADACL4Q5VUY2 407 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 NXNL2Q5VZ03 156 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms