RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ZNF724A8MTY0 619 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 IL18BPO95998 194 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 IGLV3-1P01715 115 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 IGHG3P01860 377 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 VSIG8P0DPA2 414 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZNF92Q03936 586 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 FOXF2Q12947 444 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZNF169Q14929 603 aaPredicted RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 C1orf100Q5SVJ3 147 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 MZT2BQ6NZ67 158 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZNF529Q6P280 563 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZNF585AQ6P3V2 769 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 CRIP3Q6Q6R5 217 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZNF101Q8IZC7 436 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 BATF2Q8N1L9 274 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZADH2Q8N4Q0 377 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 DVL3Q92997 716 aaPredicted RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 OR10A2Q9H208 303 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 RNF122Q9H9V4 155 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 NKIRAS2Q9NYR9 191 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 CRIM1Q9NZV1 1036 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 LOC390937A0A1W2PQ73 354 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 C5orf49A4QMS7 147 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 MEGF11A6BM72 1044 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 TMEM235A6NFC5 223 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 LDLRAD4O15165 306 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 XRCC3O43542 346 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 DHRS3O75911 302 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 LYZL6O75951 148 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ALDOBP05062 364 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 EDN3P14138 238 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 SLC6A1P30531 599 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 NKX2-5P52952 324 aaPredicted RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 TATDN3Q17R31 274 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 AGAP6Q5VW22 663 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 VWA1Q6PCB0 445 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 GLIPR1L1Q6UWM5 242 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 DRAM2Q6UX65 266 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ZNF584Q8IVC4 421 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 RPRMLQ8N4K4 120 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 RBMXL3Q8N7X1 1067 aaKnown RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 C9orf106Q8NAJ2 232 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 FCAMRQ8WWV6 532 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 CMTM3Q96MX0 182 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 SORCS2Q96PQ0 1159 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 LINC00470Q9BZP3 86 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 METTL17Q9H7H0 456 aaPredicted RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 NUDT15Q9NV35 164 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 MCUBQ9NWR8 336 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 CLCF1Q9UBD9 225 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 FLVCR2Q9UPI3 526 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 MRPS28Q9Y2Q9 187 aaKnown RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 ALG5Q9Y673 324 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 A0A0U1RQV5 110 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 TTLL8A6PVC2 850 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 GABARAPH6UMI1 98 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 RAD51DO75771 328 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 MPIG6BO95866 241 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 NGFP01138 241 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 RAB1AP62820 205 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 SNTB2Q13425 540 aaKnown RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 HLXQ14774 488 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 IGFBP7Q16270 282 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 PLEKHN1Q494U1 663 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 SLC22A6Q4U2R8 563 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 PLA1AQ53H76 456 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 OLFML2AQ68BL7 652 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 FGD2Q7Z6J4 655 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 MYPOPQ86VE0 399 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 SPACA3Q8IXA5 215 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 NKAIN3Q8N8D7 197 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 OR4D10Q8NGI6 311 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 OR8S1Q8NH09 359 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 PHF21AQ96BD5 680 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 DMRTB1Q96MA1 342 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 MRI1Q9BV20 369 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 C1QTNF6Q9BXI9 259 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 PRDM14Q9GZV8 571 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 ZNF71Q9NQZ8 489 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 DIABLOQ9NR28 239 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 V9GYS6 101 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 TPRP12270 2363 aaKnown RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 ITPR1Q14643 2758 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 A0A0A6YYD4 124 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 FAM230AA0A1W2PPH8 454 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 INMT-MINDY4F8WBC2 141 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 GSTZ1O43708 216 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 ANGPTL7O43827 346 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 CELA3BP08861 270 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 CD37P11049 281 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 FCGR2AP12318 317 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 CFPP27918 469 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 VEGFCP49767 419 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 EIF2B2P49770 351 aaKnown RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 PCBD1P61457 104 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 KISS1Q15726 138 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 BAIAP2L2Q6UXY1 529 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 AKAP14Q86UN6 197 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 CHST4Q8NCG5 386 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 DUSP18Q8NEJ0 188 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms