RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 IFNGP01579 166 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 PYCR1P32322 319 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 NAA10P41227 235 aaPredicted RBP11.2□□□□□ -0.62
CHD3-209ENST00000473376 TAF13Q15543 124 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
CHD3-209ENST00000473376 SFRP4Q6FHJ7 346 aaPredicted RBP11.2□□□□□ -0.62
CHD3-209ENST00000473376 FIP1L1Q6UN15 594 aaKnown RBP11.2□□□□□ -0.62
CHD3-209ENST00000473376 SLC36A1Q7Z2H8 476 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 FAM90A1Q86YD7 464 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 KIR3DL3Q8N743 410 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 OR56B2PQ8NGI1 322 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 LRTOMTQ8WZ04 291 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 FN3KQ9H479 309 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 MARCH7Q9H992 704 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
CHD3-209ENST00000473376 RPUSD1Q9UJJ7 312 aaKnown RBP11.2□□□□□ -0.62
CHD3-209ENST00000473376 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 DVL1O14640 695 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 CLPXO76031 633 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 CCNB2O95067 398 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 SFTPBP07988 381 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 HOXB6P17509 224 aaKnown RBP11.19□□□□□ -0.62
CHD3-209ENST00000473376 SPI1P17947 270 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 IER3P46695 156 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 PRSS12P56730 875 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 FAM3AP98173 230 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 IL5RAQ01344 420 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 GUCA2AQ02747 115 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 MICAQ29983 383 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 FAM76BQ5HYJ3 339 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 GDPGP1Q6ZNW5 385 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 BTN2A1Q7KYR7 527 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 SHFQ7M4L6 423 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 KRT74Q7RTS7 529 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 SLC16A9Q7RTY1 509 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 PRSS45Q7RTY3 260 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 C11orf53Q8IXP5 236 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 GALNT4Q8N4A0 578 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 OR8S1Q8NH09 359 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 C8orf46Q8TAG6 207 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 RNF133Q8WVZ7 376 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 SMURF1Q9HCE7 757 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 CMC2Q9NRP2 79 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 PRPF19Q9UMS4 504 aaKnown RBP11.19□□□□□ -0.62
CHD3-209ENST00000473376 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
CHD3-209ENST00000473376 V9GYQ6 96 aa11.19□□□□□ -0.62
CHD3-209ENST00000473376 DHRS12A0PJE2 317 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 ARRDC5A6NEK1 342 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 TVP23AA6NH52 213 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 A6NLC8 198 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 M0QZ24 198 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 GRPP07492 148 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 SPARCP09486 303 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 ZNF3P17036 446 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 RELBQ01201 579 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 CRMP1Q14194 572 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 LINC01590Q5TEZ4 76 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 CPLX4Q7Z7G2 160 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 CMTM4Q8IZR5 234 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 ZNF511Q8NB15 262 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 OR1M1Q8NGA1 313 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 OR8D4Q8NGM9 314 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 OR10Z1Q8NGY1 313 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 ZNRF4Q8WWF5 429 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 SGK3Q96BR1 496 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 MMP27Q9H306 513 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 CENPMQ9NSP4 180 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 MPC1Q9Y5U8 109 aa11.18□□□□□ -0.62
CHD3-209ENST00000473376 hCG_38984A0A1B0GV85 526 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 hCG_1807616A0A1W2PRN6 198 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 TMEM210A6NLX4 147 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 RIIAD1A6NNX1 92 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 DCTN3O75935 186 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 GYPAP02724 150 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 HSD11B1P28845 292 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 RPS27P42677 84 aaKnown RBP11.17□□□□□ -0.62
CHD3-209ENST00000473376 TGM4P49221 684 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 CX3CR1P49238 355 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 PRKXP51817 358 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 TIGD6Q17RP2 521 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 WDR82Q6UXN9 313 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 DPY19L4Q7Z388 723 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 ZSCAN4Q8NAM6 433 aaPredicted RBP11.17□□□□□ -0.62
CHD3-209ENST00000473376 AQP11Q8NBQ7 271 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 C19orf18Q8NEA5 215 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 OR9Q2Q8NGE9 314 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 REEP6Q96HR9 211 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 INTS14Q96SY0 518 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 OR10A2Q9H208 303 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 C16orf95Q9H693 158 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 NIPAL2Q9H841 368 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms