RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 NTN4Q9HB63 628 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 C14orf119Q9NWQ9 140 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 C1orf123Q9NWV4 160 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 ZNF319Q9P2F9 582 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 CTSZQ9UBR2 303 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 TRAV40A0A0B4J280 105 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 KIR2DS1A0A191URI9 304 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 hCG_38984A0A1B0GV85 526 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 TCRBV3S1A0A5B6 114 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 DNAJC9-AS1A6NH13 148 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 A6NLC8 198 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 C22orf46C9J442 243 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 LGALS8O00214 317 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 PRODHO43272 600 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 SELENOFO60613 162 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 FKBP6O75344 327 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 PLATP00750 562 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 APOC1P02654 83 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 LYNP07948 512 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 H2BFMP0C1H6 154 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 PPIAL4GP0DN37 164 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 DDOSTP39656 456 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 NAA10P41227 235 aaPredicted RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 GSK3AP49840 483 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 CDK5Q00535 292 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 OR8B8Q15620 311 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 KLHL12Q53G59 568 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 TMEM236Q5W0B7 351 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 RBMS3Q6XE24 437 aaKnown RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 RHOUQ7L0Q8 258 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 DOK3Q7L591 496 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 WDR86Q86TI4 376 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 CPOQ8IVL8 374 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 GCSAMQ8N6F7 178 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 PAPD5Q8NDF8 572 aaKnown RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 BBS1Q8NFJ9 593 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 OR52H1Q8NGJ2 320 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 OR8S1Q8NH09 359 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 OTOSQ8NHW6 89 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 C1orf147Q96MC9 270 aaPredicted RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 DUX5Q96PT3 197 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 MS4A7Q9GZW8 240 aaPredicted RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 PPP1R3EQ9H7J1 279 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 YY1AP1Q9H869 796 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 ZNF556Q9HAH1 456 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 SMURF1Q9HCE7 757 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 BRD7Q9NPI1 651 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 DNAJB9Q9UBS3 223 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 POMPQ9Y244 141 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 KLHDC2Q9Y2U9 406 aa7.51□□□□□ -1.21
USF1-204ENST00000472217 SOX21Q9Y651 276 aaPredicted RBP7.51□□□□□ -1.21
USF1-204ENST00000472217 TRAV38-1A0A0B4J264 116 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 hCG_1807616A0A1W2PRN6 198 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 OOEPA6NGQ2 149 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 ANKRD30BLA7E2S9 258 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 TNFRSF13BO14836 293 aaPredicted RBP7.5□□□□□ -1.21
USF1-204ENST00000472217 ADAM20O43506 726 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 ENSAO43768 121 aaKnown RBP7.5□□□□□ -1.21
USF1-204ENST00000472217 DNAJC8O75937 253 aaPredicted RBP7.5□□□□□ -1.21
USF1-204ENST00000472217 LHBP01229 141 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 HMGN1P05114 100 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 ANXA8P13928 327 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 EGR1P18146 543 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 SLC2A5P22732 501 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 CFL1P23528 166 aaKnown RBP7.5□□□□□ -1.21
USF1-204ENST00000472217 FGF12P61328 243 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 CSNK2BP67870 215 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 MZT1Q08AG7 82 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 BAMBIQ13145 260 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 KCNJ8Q15842 424 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 C9orf139Q6ZV77 190 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 FAM90A1Q86YD7 464 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 ZNF454Q8N9F8 522 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 THEM6Q8WUY1 208 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 PGAM5Q96HS1 289 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 TECTBQ96PL2 329 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 OR10A2Q9H208 303 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 SLC25A19Q9HC21 320 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 TRIM36Q9NQ86 728 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 ERVK-18Q9QC07 812 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 RHBDD3Q9Y3P4 386 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 WNK2Q9Y3S1 2297 aa7.5□□□□□ -1.21
USF1-204ENST00000472217 IGHV3OR15-7A0A075B7D8 119 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 GSC2O15499 205 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 NDUFA2O43678 99 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 FCN3O75636 299 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 TIPRLO75663 272 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 GYPAP02724 150 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 PRTN3P24158 256 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 ACKR3P25106 362 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 GNALP38405 381 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 NPY4RP50391 375 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 HCCSP53701 268 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 RPS7P62081 194 aaKnown RBP7.49□□□□□ -1.21
USF1-204ENST00000472217 POU4F2Q12837 409 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 APOFQ13790 326 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 AWAT1Q58HT5 328 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms