RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SGK3Q96BR1 496 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 LRGUKQ96M69 825 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 INTS14Q96SY0 518 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 PCGF1Q9BSM1 259 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 SP140LQ9H930 580 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 H3BN98 237 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 GYPAP02724 150 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 LIPFP07098 398 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 GSTT1P30711 240 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 GRK5P34947 590 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 BPIFB3P59826 476 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 FAM3AP98173 230 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 DEFB112Q30KQ8 113 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 GCSAMQ8N6F7 178 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 GIPC3Q8TF64 312 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 ZDHHC16Q969W1 377 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 CCDC124Q96CT7 223 aaKnown RBP18.71■□□□□ 0.59
C9orf3-213ENST00000471978 ASB9Q96DX5 294 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 REEP6Q96HR9 211 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 FEVQ99581 238 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 ABHD6Q9BV23 337 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 RASSF4Q9H2L5 321 aa18.71■□□□□ 0.59
C9orf3-213ENST00000471978 UNKLQ9H9P5 680 aaKnown RBP18.71■□□□□ 0.59
C9orf3-213ENST00000471978 PRPF19Q9UMS4 504 aaKnown RBP18.71■□□□□ 0.59
C9orf3-213ENST00000471978 ZNF879B4DU55 563 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 TMPRSS2O15393 492 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 HOXA3O43365 443 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-213ENST00000471978 CST1P01037 141 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 APOC1P02654 83 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 SFTPBP07988 381 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 CFHR2P36980 270 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 IL13RA1P78552 427 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 GK3PQ14409 553 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 FAM57BQ71RH2 274 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 FAM90A1Q86YD7 464 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 PNLDC1Q8NA58 520 aaKnown RBP18.7■□□□□ 0.58
C9orf3-213ENST00000471978 RNF133Q8WVZ7 376 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 TAF15Q92804 592 aaKnown RBP eCLIP18.7■□□□□ 0.581e-6■■■■□ 22
C9orf3-213ENST00000471978 CHID1Q9BWS9 393 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 SMURF1Q9HCE7 757 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 DNAJC27Q9NZQ0 273 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 KIF17Q9P2E2 1029 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 TRRAPQ9Y4A5 3859 aa18.7■□□□□ 0.58
C9orf3-213ENST00000471978 P2RY10O00398 339 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 TOX4O94842 621 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 GLCEO94923 617 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 LHBP01229 141 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 T-ENOLP0DO92 83 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 ZNF121P58317 390 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-213ENST00000471978 POU4F2Q12837 409 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 GFOD2Q3B7J2 385 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 C16orf87Q6PH81 154 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 SHFQ7M4L6 423 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 PRSS45Q7RTY3 260 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 CLPTM1LQ96KA5 538 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 AMELYQ99218 206 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 OR51V1Q9H2C8 321 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 PRDM13Q9H4Q3 707 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 MARCH7Q9H992 704 aa18.69■□□□□ 0.58
C9orf3-213ENST00000471978 IGHV3OR15-7A0A075B7D8 119 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 PAICSP22234 425 aaKnown RBP18.68■□□□□ 0.58
C9orf3-213ENST00000471978 CFL1P23528 166 aaKnown RBP18.68■□□□□ 0.58
C9orf3-213ENST00000471978 POU1F1P28069 291 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 OPRL1P41146 370 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 TEX36Q5VZQ5 186 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 RUSC1-AS1Q66K80 236 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 WDR86Q86TI4 376 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 C11orf53Q8IXP5 236 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 CCDC197Q8NCU1 140 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 OR52H1Q8NGJ2 320 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 WDFY2Q96P53 400 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 OR10A2Q9H208 303 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 BRD7Q9NPI1 651 aa18.68■□□□□ 0.58
C9orf3-213ENST00000471978 hCG_38984A0A1B0GV85 526 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 ARRDC5A6NEK1 342 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 POM121CA8CG34 1229 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 SRRM5B3KS81 715 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 DVL1O14640 695 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 H2BFMP0C1H6 154 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 MMP9P14780 707 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 GSK3AP49840 483 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 PRR31Q5SQ13 230 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 METTL11BQ5VVY1 283 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 BTN2A1Q7KYR7 527 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 RHOUQ7L0Q8 258 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 TIGD4Q8IY51 512 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 ADGRG5Q8IZF4 528 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 OR1M1Q8NGA1 313 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 LRRC29Q8WV35 223 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 TMIGD2Q96BF3 282 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 TBX15Q96SF7 602 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 RNPEPL1Q9HAU8 725 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 NOX4Q9NPH5 578 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 TNFRSF19Q9NS68 423 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 ZNF319Q9P2F9 582 aa18.67■□□□□ 0.58
C9orf3-213ENST00000471978 CENPVL3A0A0U1RRI6 287 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 GNGT2O14610 69 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 ACOT8O14734 319 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 FCN3O75636 299 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 FAM107AO95990 144 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms