RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ABHD6Q9BV23 337 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 ZMAT3Q9HA38 289 aaKnown RBP18.13■□□□□ 0.49
TTC28-204ENST00000468807 TRIM36Q9NQ86 728 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 TAS2R1Q9NYW7 299 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 CTSZQ9UBR2 303 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 MDFIC2A0A1B0GVS7 189 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 E2F6O75461 281 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 GLCEO94923 617 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 APOC1P02654 83 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 GYPAP02724 150 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 H2BFMP0C1H6 154 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 HKR1P10072 659 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 DDOSTP39656 456 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 NPY4RP50391 375 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 ZNF121P58317 390 aaPredicted RBP18.12■□□□□ 0.49
TTC28-204ENST00000468807 FOXL1Q12952 345 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 GK3PQ14409 553 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 CD276Q5ZPR3 534 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 RNF133Q8WVZ7 376 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 SPSB4Q96A44 273 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 SP140LQ9H930 580 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 MARCH7Q9H992 704 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 PCDHGB1Q9Y5G3 927 aa18.12■□□□□ 0.49
TTC28-204ENST00000468807 ACOT8O14734 319 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 PTBP3O95758 552 aaKnown RBP18.11■□□□□ 0.49
TTC28-204ENST00000468807 PLATP00750 562 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 FAM3AP98173 230 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 POU4F2Q12837 409 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 GINS1Q14691 196 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 SLC9A3R2Q15599 337 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 TUSC1Q2TAM9 212 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 KLHL12Q53G59 568 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 GPR157Q5UAW9 335 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 PLBD1Q6P4A8 553 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 SHFQ7M4L6 423 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 TMEM179BQ7Z7N9 219 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.11■□□□□ 0.49
TTC28-204ENST00000468807 CANT1Q8WVQ1 401 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 SGK3Q96BR1 496 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 PGAM5Q96HS1 289 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 AMELYQ99218 206 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 OR10A2Q9H208 303 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 C1orf21Q9H246 121 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 RASSF4Q9H2L5 321 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 ZNF556Q9HAH1 456 aa18.11■□□□□ 0.49
TTC28-204ENST00000468807 IGHV3OR15-7A0A075B7D8 119 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 ARRDC5A6NEK1 342 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 PRR23D1E9PI22 279 aaPredicted RBP18.1■□□□□ 0.49
TTC28-204ENST00000468807 RNASE1P07998 156 aaKnown RBP18.1■□□□□ 0.49
TTC28-204ENST00000468807 PRR23D2P0DMB1 279 aaPredicted RBP18.1■□□□□ 0.49
TTC28-204ENST00000468807 GNALP38405 381 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 C9orf139Q6ZV77 190 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 SPATA24Q86W54 205 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 GCSAMQ8N6F7 178 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 OR52H1Q8NGJ2 320 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 SGMS2Q8NHU3 365 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 ZDHHC16Q969W1 377 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 PAPOLGQ9BWT3 736 aaKnown RBP18.1■□□□□ 0.49
TTC28-204ENST00000468807 SMURF1Q9HCE7 757 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 KIF17Q9P2E2 1029 aa18.1■□□□□ 0.49
TTC28-204ENST00000468807 AQP12BA6NM10 295 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 NDUFA2O43678 99 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 SELENOFO60613 162 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 LYNP07948 512 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 SFTPBP07988 381 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 EGR1P18146 543 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 CFL1P23528 166 aaKnown RBP18.09■□□□□ 0.49
TTC28-204ENST00000468807 RPS7P62081 194 aaKnown RBP18.09■□□□□ 0.49
TTC28-204ENST00000468807 FAM90A1Q86YD7 464 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 AQP12AQ8IXF9 295 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 TIGD4Q8IY51 512 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 HS3ST5Q8IZT8 346 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 THEM6Q8WUY1 208 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 LRRC29Q8WV35 223 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 TNFRSF19Q9NS68 423 aa18.09■□□□□ 0.49
TTC28-204ENST00000468807 hCG_38984A0A1B0GV85 526 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 TMPRSS2O15393 492 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 SPRY1O43609 319 aaPredicted RBP18.08■□□□□ 0.48
TTC28-204ENST00000468807 TOX4O94842 621 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 OPRL1P41146 370 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 NAA10P41227 235 aaPredicted RBP18.08■□□□□ 0.48
TTC28-204ENST00000468807 GSK3AP49840 483 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 DEFB112Q30KQ8 113 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 RUSC1-AS1Q66K80 236 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 WDR86Q86TI4 376 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 TAF15Q92804 592 aaKnown RBP eCLIP18.08■□□□□ 0.48
TTC28-204ENST00000468807 PPP1R3EQ9H7J1 279 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 ZNF319Q9P2F9 582 aa18.08■□□□□ 0.48
TTC28-204ENST00000468807 ZNF879B4DU55 563 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 GYG2O15488 501 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 HOXA3O43365 443 aaPredicted RBP18.07■□□□□ 0.48
TTC28-204ENST00000468807 OSMP13725 252 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 PRKACGP22612 351 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 CFHR2P36980 270 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 CSNK2BP67870 215 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 FLOT2Q14254 428 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 METTL11BQ5VVY1 283 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 PRSS45Q7RTY3 260 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 CPOQ8IVL8 374 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 PNLDC1Q8NA58 520 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms