RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 CGGBP1Q9UFW8 167 aaPredicted RBP6.67□□□□□ -1.34
COL6A3-208ENST00000468792 POU2F3Q9UKI9 436 aa6.67□□□□□ -1.34
COL6A3-208ENST00000468792 ANAPC10Q9UM13 185 aa6.67□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF175Q9Y473 711 aa6.67□□□□□ -1.34
COL6A3-208ENST00000468792 NCKAP5O14513 1909 aa6.67□□□□□ -1.34
COL6A3-208ENST00000468792 FREM2Q5SZK8 3169 aa6.67□□□□□ -1.34
COL6A3-208ENST00000468792 TRAV6A0A075B6T7 132 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 MEIKINA0A087WXM9 373 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 IGKV1-9A0A0C4DH69 117 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 F5H5K5 113 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 KDM4BO94953 1096 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 IGHG3P01860 377 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 CEACAM1P13688 526 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 ABOP16442 354 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 NAT1P18440 290 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 MAGEA5P43359 124 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 MEOX1P50221 254 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 TNFSF10P50591 281 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 PPIAP62937 165 aaKnown RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 PSG4Q00888 419 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 TCF15Q12870 199 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 UNC119Q13432 240 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 CDK10Q15131 360 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 NDUFA5Q16718 116 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 CEACAM16Q2WEN9 425 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 LINC00303Q3SY05 128 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 RTL6Q6ICC9 239 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 STEAP1BQ6NZ63 245 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 ASCL4Q6XD76 172 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 LINC00696Q6ZRV3 163 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 COLCA1Q6ZS62 124 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 TMPRSS7Q7RTY8 843 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 GALNTL5Q7Z4T8 443 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 DEFB124Q8NES8 71 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 SEMA6DQ8NFY4 1073 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 OR4C16Q8NGL9 310 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 OR13C9Q8NGT0 318 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 OR10R2Q8NGX6 335 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 ZFAND1Q8TCF1 268 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 GIMAP1Q8WWP7 306 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 SGK3Q96BR1 496 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF837Q96EG3 531 aaPredicted RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 FAM210AQ96ND0 272 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 FYTTD1Q96QD9 318 aaKnown RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 URM1Q9BTM9 101 aaKnown RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 TM2D1Q9BX74 207 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 C1QTNF5Q9BXJ0 243 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 GON7Q9BXV9 100 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 OR2H1Q9GZK4 316 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 CST11Q9H112 138 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF552Q9H707 407 aaPredicted RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 GPN1Q9HCN4 374 aaPredicted RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 GLRX2Q9NS18 164 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 ING4Q9UNL4 249 aa6.66□□□□□ -1.34
COL6A3-208ENST00000468792 NOSIPQ9Y314 301 aaKnown RBP6.66□□□□□ -1.34
COL6A3-208ENST00000468792 FOXI3A8MTJ6 420 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF587BE7ETH6 402 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 E9PLN8 166 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 H3BSH0 61 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 TNFRSF10AO00220 468 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 TM4SF5O14894 197 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 XRCC2O43543 280 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF780AO75290 641 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 CEACAM4O75871 244 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 CYB5AP00167 134 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 SLC2A1P11166 492 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 FCGR2AP12318 317 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ANXA3P12429 323 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 GTF2F2P13984 249 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF24P17028 368 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF32P17041 273 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 PRKACBP22694 351 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 PTGFRP43088 359 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 CBX5P45973 191 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 SLC6A9P48067 706 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 CD83Q01151 205 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 PLGLB1Q02325 96 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 RTP5Q14D33 572 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 FCN2Q15485 313 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 OR8B8Q15620 311 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 KISS1Q15726 138 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ST3GAL2Q16842 350 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ACTBL2Q562R1 376 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF766Q5HY98 468 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 TMEM255AQ5JRV8 349 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 TSPO2Q5TGU0 170 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF626Q68DY1 528 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 AWAT2Q6E213 333 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 SFRP4Q6FHJ7 346 aaPredicted RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 MTFR2Q6P444 385 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 CRIP3Q6Q6R5 217 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 GLIPR1L1Q6UWM5 242 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 SLC36A1Q7Z2H8 476 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.65□□□□□ -1.34
COL6A3-208ENST00000468792 NAA40Q86UY6 237 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 SKA3Q8IX90 412 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 GABRG1Q8N1C3 465 aa6.65□□□□□ -1.34
COL6A3-208ENST00000468792 LRRC18Q8N456 261 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms