RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 FASP25445 335 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 NAA10P41227 235 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-207ENST00000468267 MZT1Q08AG7 82 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 ZNF154Q13106 437 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 ZNF418Q8TF45 676 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-207ENST00000468267 DVL3Q92997 716 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-207ENST00000468267 NEIL1Q96FI4 390 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-207ENST00000468267 PGAM5Q96HS1 289 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 TEAD3Q99594 435 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 SSBP3Q9BWW4 388 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-207ENST00000468267 BRD7Q9NPI1 651 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 INSIG2Q9Y5U4 225 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 hCG_38984A0A1B0GV85 526 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 VENTXO95231 258 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 ALOX5APP20292 161 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 GSK3AP49840 483 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 HCCSP53701 268 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 PAX2Q02962 417 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 DCDC5Q6ZRR9 648 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 YIPF3Q9GZM5 350 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 RGCCQ9H4X1 137 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 KRT84Q9NSB2 600 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 C14orf119Q9NWQ9 140 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 OR5V1Q9UGF6 321 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 LAMP5Q9UJQ1 280 aa14.29□□□□□ -0.12
SSBP1-207ENST00000468267 CCDC182A6NF36 153 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 PRKYO43930 277 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 MITFO75030 526 aaPredicted RBP14.28□□□□□ -0.12
SSBP1-207ENST00000468267 GRPP07492 148 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 FCGR1AP12314 374 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 PAX8Q06710 450 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 GFOD2Q3B7J2 385 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 KDM4DQ6B0I6 523 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 LYPD2Q6UXB3 125 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 LRRN1Q6UXK5 716 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 USP43Q70EL4 1123 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 NLRC3Q7RTR2 1065 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 AMIGO2Q86SJ2 522 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 ZDHHC13Q8IUH4 622 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 C19orf18Q8NEA5 215 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 SEMA6DQ8NFY4 1073 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 OR8B3Q8NGG8 313 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 OR8B2Q96RD0 313 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 GABARAPL1Q9H0R8 117 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 NIPAL2Q9H841 368 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 C1orf123Q9NWV4 160 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 AUP1Q9Y679 476 aa14.28□□□□□ -0.12
SSBP1-207ENST00000468267 ZAR1LA6NP61 321 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 LGALS8O00214 317 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 EPHA2P29317 976 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 CD80P33681 288 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 PITPNBP48739 271 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 GNB2P62879 340 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 EFNB1P98172 346 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 HOXA4Q00056 320 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-207ENST00000468267 OR8B8Q15620 311 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 LCN1P1Q5VSP4 162 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 SLX4IPQ5VYV7 408 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 DEGS2Q6QHC5 323 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 KRT77Q7Z794 578 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 BOLLQ8N9W6 283 aaKnown RBP14.27□□□□□ -0.13
SSBP1-207ENST00000468267 CSNK2A3Q8NEV1 391 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 OR8S1Q8NH09 359 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 LRTOMTQ8WZ04 291 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 MRI1Q9BV20 369 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 PRRG3Q9BZD7 231 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 RHBDD3Q9Y3P4 386 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 LRP12Q9Y561 859 aa14.27□□□□□ -0.13
SSBP1-207ENST00000468267 A6NLC8 198 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 CIB2O75838 187 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 RGS9O75916 674 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-207ENST00000468267 LHBP01229 141 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 FPR2P25090 351 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 PSMB10P40306 273 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 HILS1P60008 231 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 PSMA6P60900 246 aaKnown RBP14.26□□□□□ -0.13
SSBP1-207ENST00000468267 KCNJ8Q15842 424 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 SNCBQ16143 134 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 SFRP4Q6FHJ7 346 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-207ENST00000468267 KCTD18Q6PI47 426 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-207ENST00000468267 ZNF841Q6ZN19 808 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 ZNF826PQ6ZT77 177 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 ASRGL1Q7L266 308 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 MEPCEQ7L2J0 689 aaKnown RBP14.26□□□□□ -0.13
SSBP1-207ENST00000468267 C11orf53Q8IXP5 236 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 ZFAND2BQ8WV99 257 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 RAB40AQ8WXH6 277 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 DACT3Q96B18 629 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-207ENST00000468267 SLC6A7Q99884 636 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 SUCNR1Q9BXA5 334 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 TRIM36Q9NQ86 728 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 CLN8Q9UBY8 286 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 ZNF391Q9UJN7 358 aa14.26□□□□□ -0.13
SSBP1-207ENST00000468267 TRAV38-1A0A0B4J264 116 aa14.25□□□□□ -0.13
SSBP1-207ENST00000468267 IGHV2-70DA0A0C4DH43 119 aa14.25□□□□□ -0.13
SSBP1-207ENST00000468267 ACOD1A6NK06 481 aa14.25□□□□□ -0.13
SSBP1-207ENST00000468267 C3orf80F5H4A9 247 aa14.25□□□□□ -0.13
SSBP1-207ENST00000468267 M0R129 80 aa14.25□□□□□ -0.13
SSBP1-207ENST00000468267 PHYHO14832 338 aa14.25□□□□□ -0.13
SSBP1-207ENST00000468267 TNFRSF13BO14836 293 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms