RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 ST6GAL2Q96JF0 529 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 TNFRSF13CQ96RJ3 184 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 MARVELD1Q9BSK0 173 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 DEFB127Q9H1M4 99 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 SLC26A1Q9H2B4 701 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 HINT3Q9NQE9 182 aaKnown RBP6.87□□□□□ -1.31
USP54-210ENST00000466048 HHLA2Q9UM44 414 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 CACNA1EQ15878 2313 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 MEIKINA0A087WXM9 373 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 BTBD17A6NE02 478 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 SEC14L6B5MCN3 397 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 HRKO00198 91 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 BCL2L11O43521 198 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 DNPH1O43598 174 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 CX3CR1P49238 355 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 SKP2Q13309 424 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 MOGAT2Q3SYC2 334 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 TP53I3Q53FA7 332 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 LEG1Q6P5S2 330 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 TMEM81Q6P7N7 255 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 WDR88Q6ZMY6 472 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 TMPRSS7Q7RTY8 843 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 GLRX5Q86SX6 157 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 DUSP18Q8NEJ0 188 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 PATZ1Q9HBE1 687 aaKnown RBP6.87□□□□□ -1.31
USP54-210ENST00000466048 KCNG2Q9UJ96 466 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 DTX4Q9Y2E6 619 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 CLDN16Q9Y5I7 305 aa6.87□□□□□ -1.31
USP54-210ENST00000466048 TRAV27A0A087WT01 109 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 SLC22A20A6NK97 555 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CDC42EP2O14613 210 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 GDF9O60383 454 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CLPSP04118 112 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 SNRPBP14678 240 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 RAB5AP20339 215 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 HTR2CP28335 458 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ODF4Q2M2E3 257 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 MEX3DQ86XN8 651 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 OR11G2Q8NGC1 345 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 OR4C3Q8NH37 302 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 FBXW5Q969U6 566 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 GPX7Q96SL4 187 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 DYNLRB1Q9NP97 96 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CLEC2DQ9UHP7 191 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 AHCTF1Q8WYP5 2266 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 NINQ8N4C6 2090 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CBY3A6NI87 242 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 TMEM212A6NML5 194 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CD79AP11912 226 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CCR6P51684 374 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CLDN6P56747 220 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 RPS18P62269 152 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 LCN6P62502 163 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 POU3F1Q03052 451 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 CFHR1Q03591 330 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 KLRB1Q12918 225 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 SLC17A1Q14916 467 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 BEX5Q5H9J7 111 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ATG4DQ86TL0 474 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 MAML2Q8IZL2 1156 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 SLC38A6Q8IZM9 456 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 NXF2Q9GZY0 626 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 OR10A2Q9H208 303 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 C20orf141Q9NUB4 165 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 THADAQ6YHU6 1953 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 A0A1B0GV50 99 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 HSPB2A8KAH6 182 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 HMSDA8MTL9 139 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 UMAD1C9J7I0 102 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 NTN3O00634 580 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 MSTNO14793 375 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 TSPAN2O60636 221 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 MMP7P09237 267 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 INHBBP09529 407 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 TDGF1P13385 188 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 FGF9P31371 208 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 SLC25A1P53007 311 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 RPP30P78346 268 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 MYBPHQ13203 477 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 P2RY14Q15391 338 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 MPPED2Q15777 294 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 HSPB2Q16082 182 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ZNF74Q16587 644 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ABLIM2Q6H8Q1 611 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 ZNF322Q6U7Q0 402 aaPredicted RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 DBX2Q6ZNG2 339 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 MRPL21Q7Z2W9 205 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 SPICQ8N5J4 248 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 OR2AK2Q8NG84 335 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 FAM213BQ8TBF2 198 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 PTP4A1Q93096 173 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 RBMXL1Q96E39 390 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 ARSGQ96EG1 525 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 SORCS2Q96PQ0 1159 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 PAPOLGQ9BWT3 736 aaKnown RBP6.86□□□□□ -1.31
USP54-210ENST00000466048 TTTY10Q9BZA0 68 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 TAF9BQ9HBM6 251 aa6.86□□□□□ -1.31
USP54-210ENST00000466048 CHST11Q9NPF2 352 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms