RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 A0A1W2PQD3 144 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 A8MVM7 634 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 M0R036 132 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 NQO2P16083 231 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 ZNF708P17019 499 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 TAS2R46P59540 309 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 RAB2AP61019 212 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 ACER2Q5QJU3 275 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 C1orf140Q5VVS0 124 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 ARMC6Q6NXE6 501 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 ZNF248Q8NDW4 579 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 ADOQ96SZ5 270 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 C1orf123Q9NWV4 160 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 PLA2G2EQ9NZK7 142 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 FBXL17Q9UF56 701 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 KIR2DS5A0A0G2JLQ3 304 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 A0A0G2JNG1 304 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 KIR2DS3K7RE56 304 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 PPIHO43447 177 aaKnown RBP17.51■□□□□ 0.39
SDF4-205ENST00000465727 PRKNO60260 465 aaPredicted RBP17.51■□□□□ 0.39
SDF4-205ENST00000465727 IFNA17P01571 189 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
SDF4-205ENST00000465727 KIR2DS5Q14953 304 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 GUK1Q16774 197 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 PLAC9Q5JTB6 97 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 AADACL3Q5VUY0 350 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 KLHL24Q6TFL4 600 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 C12orf76Q8N812 135 aaPredicted RBP17.51■□□□□ 0.39
SDF4-205ENST00000465727 ISOC2Q96AB3 205 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 IP6K3Q96PC2 410 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 PRR13Q9NZ81 148 aa17.51■□□□□ 0.39
SDF4-205ENST00000465727 TMED7-TICAM2A0A0A6YYA0 188 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 A0A0A6YYD4 124 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 LOC101059948A0A1B0GTJ6 334 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 DEDDO75618 318 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 NUDT14O95848 222 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 FCGR2CP31995 323 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 THBS4P35443 961 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 KIR2DL1P43626 348 aaPredicted RBP17.5■□□□□ 0.39
SDF4-205ENST00000465727 OR3A2P47893 321 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 GKN2Q86XP6 184 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 OR56B1Q8NGI3 324 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 OR13C9Q8NGT0 318 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 OR13G1Q8NGZ3 307 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 DNAJA3Q96EY1 480 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 ARV1Q9H2C2 271 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 PLEKHA2Q9HB19 425 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 B3GALT5Q9Y2C3 310 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 MRPS28Q9Y2Q9 187 aaKnown RBP17.5■□□□□ 0.39
SDF4-205ENST00000465727 LRP4O75096 1905 aa17.5■□□□□ 0.39
SDF4-205ENST00000465727 SFTPBP07988 381 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 HOXB5P09067 269 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 SEC11BP0C7V7 166 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 PI3P19957 117 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 AMY2BP19961 511 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 HNRNPA2B1P22626 353 aaKnown RBP17.49■□□□□ 0.39
SDF4-205ENST00000465727 ECI1P42126 302 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 HTR5AP47898 357 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 ID4P47928 161 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 SULT1A1P50225 295 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 TDGQ13569 410 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 LINC00346Q8IVM7 164 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 MRPL38Q96DV4 380 aaKnown RBP17.49■□□□□ 0.39
SDF4-205ENST00000465727 SCRT1Q9BWW7 348 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 RTN4RQ9BZR6 473 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 SPACA1Q9HBV2 294 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 CENPMQ9NSP4 180 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 LUZP4Q9P127 313 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 SUSD2Q9UGT4 822 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 TUBD1Q9UJT1 453 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 C2orf16Q68DN1 1984 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 hCG_1809904A0A1W2PP81 198 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 A0A1W2PR64 198 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 A0A1W2PRV1 198 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 CDC14BO60729 498 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 AHSA1O95433 338 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 DANCRP0C864 163 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 SUCLG1P53597 346 aaKnown RBP17.49■□□□□ 0.39
SDF4-205ENST00000465727 TMEM33P57088 247 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 MIDNQ504T8 468 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 OR2A2Q6IF42 318 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 GLIPR1L1Q6UWM5 242 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 SNIP1Q8TAD8 396 aaKnown RBP17.49■□□□□ 0.39
SDF4-205ENST00000465727 PRRX2Q99811 253 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 MESP1Q9BRJ9 268 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 TMEM59Q9BXS4 323 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 PBOV1Q9GZY1 135 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 TOLLIPQ9H0E2 274 aa17.49■□□□□ 0.39
SDF4-205ENST00000465727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.49■□□□□ 0.39
SDF4-205ENST00000465727 ALG1L2C9J202 215 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 SOCS1O15524 211 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 MPIG6BO95866 241 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 IFNA2P01563 188 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 FOSL1P15407 271 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 ZNF20P17024 532 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 IL12BP29460 328 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 RBMXP38159 391 aaKnown RBP17.48■□□□□ 0.39
SDF4-205ENST00000465727 TNFRSF4P43489 277 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 DAP3P51398 398 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms