RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 WDR25Q64LD2 544 aaPredicted RBP21.57■■□□□ 1.04
U2AF1-206ENST00000464750 RBMS3Q6XE24 437 aaKnown RBP21.57■■□□□ 1.04
U2AF1-206ENST00000464750 PRSS45Q7RTY3 260 aa21.57■■□□□ 1.04
U2AF1-206ENST00000464750 SGK3Q96BR1 496 aa21.57■■□□□ 1.04
U2AF1-206ENST00000464750 TENM1Q9UKZ4 2725 aa21.57■■□□□ 1.04
U2AF1-206ENST00000464750 hCG_38984A0A1B0GV85 526 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 C3orf80F5H4A9 247 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 PRODHO43272 600 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 DNAJC8O75937 253 aaPredicted RBP21.56■■□□□ 1.04
U2AF1-206ENST00000464750 H2BFMP0C1H6 154 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 PSMB10P40306 273 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 UBA52P62987 128 aaKnown RBP21.56■■□□□ 1.04
U2AF1-206ENST00000464750 CDK5Q00535 292 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 KCNJ8Q15842 424 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 TUSC1Q2TAM9 212 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 GFOD2Q3B7J2 385 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 SFRP4Q6FHJ7 346 aaPredicted RBP21.56■■□□□ 1.04
U2AF1-206ENST00000464750 ZNF826PQ6ZT77 177 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 RHOUQ7L0Q8 258 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 DOK3Q7L591 496 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 BCL6BQ8N143 479 aaPredicted RBP21.56■■□□□ 1.04
U2AF1-206ENST00000464750 PARP8Q8N3A8 854 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 OR52H1Q8NGJ2 320 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 OR8S1Q8NH09 359 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 GCDHQ92947 438 aaPredicted RBP21.56■■□□□ 1.04
U2AF1-206ENST00000464750 OR10A2Q9H208 303 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 BRD7Q9NPI1 651 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 C14orf119Q9NWQ9 140 aa21.56■■□□□ 1.04
U2AF1-206ENST00000464750 hCG_1807616A0A1W2PRN6 198 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 TMEM89A2RUT3 159 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 LYNP07948 512 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 PPIAL4GP0DN37 164 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 IGHV4-38-2P0DP08 117 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 OR8B8Q15620 311 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 ZNF841Q6ZN19 808 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 CPOQ8IVL8 374 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 PAPD5Q8NDF8 572 aaKnown RBP21.55■■□□□ 1.04
U2AF1-206ENST00000464750 BBS1Q8NFJ9 593 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 OTOSQ8NHW6 89 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 UPRTQ96BW1 309 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 PGAM5Q96HS1 289 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 TECTBQ96PL2 329 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 NUDT16L1Q9BRJ7 211 aaKnown RBP21.55■■□□□ 1.04
U2AF1-206ENST00000464750 SLC25A19Q9HC21 320 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 ZNF319Q9P2F9 582 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 CTSZQ9UBR2 303 aa21.55■■□□□ 1.04
U2AF1-206ENST00000464750 IGHV3OR16-10A0A075B7F0 116 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 OOEPA6NGQ2 149 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 CFL1P23528 166 aaKnown RBP21.54■■□□□ 1.04
U2AF1-206ENST00000464750 NAA10P41227 235 aaPredicted RBP21.54■■□□□ 1.04
U2AF1-206ENST00000464750 COMPP49747 757 aaPredicted RBP21.54■■□□□ 1.04
U2AF1-206ENST00000464750 RPS7P62081 194 aaKnown RBP21.54■■□□□ 1.04
U2AF1-206ENST00000464750 TMEM236Q5W0B7 351 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 ZNF454Q8N9F8 522 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 THEM6Q8WUY1 208 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 MS4A7Q9GZW8 240 aaPredicted RBP21.54■■□□□ 1.04
U2AF1-206ENST00000464750 TRIM36Q9NQ86 728 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 KIF17Q9P2E2 1029 aa21.54■■□□□ 1.04
U2AF1-206ENST00000464750 TRAV40A0A0B4J280 105 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 KIR2DS1A0A191URI9 304 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 C22orf46C9J442 243 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 CFPP27918 469 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 SLC35D3Q5M8T2 416 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 WDR86Q86TI4 376 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-206ENST00000464750 GCSAMQ8N6F7 178 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 ZNF48Q96MX3 618 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-206ENST00000464750 TEX12Q9BXU0 123 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 KLHDC2Q9Y2U9 406 aa21.53■■□□□ 1.04
U2AF1-206ENST00000464750 TRAV38-1A0A0B4J264 116 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 ADAM20O43506 726 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 SLC2A5P22732 501 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 GSK3AP49840 483 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 NPY4RP50391 375 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 DNAJC9Q8WXX5 260 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 PAPOLGQ9BWT3 736 aaKnown RBP21.52■■□□□ 1.04
U2AF1-206ENST00000464750 CADM1Q9BY67 442 aaKnown RBP21.52■■□□□ 1.04
U2AF1-206ENST00000464750 RGCCQ9H4X1 137 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 ERVK-18Q9QC07 812 aa21.52■■□□□ 1.04
U2AF1-206ENST00000464750 DNAJC9-AS1A6NH13 148 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 ENSAO43768 121 aaKnown RBP21.51■■□□□ 1.03
U2AF1-206ENST00000464750 TIPRLO75663 272 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 EGR1P18146 543 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 GNALP38405 381 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 PSMA6P60900 246 aaKnown RBP21.51■■□□□ 1.03
U2AF1-206ENST00000464750 CSNK2A3Q8NEV1 391 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 NRBF2Q96F24 287 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 DUX5Q96PT3 197 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 PPP1R3EQ9H7J1 279 aa21.51■■□□□ 1.03
U2AF1-206ENST00000464750 PAPOLBQ9NRJ5 636 aaKnown RBP21.51■■□□□ 1.03
U2AF1-206ENST00000464750 GSC2O15499 205 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 PLATP00750 562 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 GYPAP02724 150 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 FGF12P61328 243 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 SNAPC1Q16533 368 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 C9orf139Q6ZV77 190 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 FAM90A1Q86YD7 464 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 OR1M1Q8NGA1 313 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 SMURF1Q9HCE7 757 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 TVP23BQ9NYZ1 205 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms