RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 PAX8Q06710 450 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 WDR25Q64LD2 544 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 LRRN1Q6UXK5 716 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 RBMS3Q6XE24 437 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 BCL6BQ8N143 479 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 BBS1Q8NFJ9 593 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 THEM6Q8WUY1 208 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 RAB40AQ8WXH6 277 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 SPSB4Q96A44 273 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 DUX5Q96PT3 197 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 NUDT16L1Q9BRJ7 211 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 SP140LQ9H930 580 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 FAM53CQ9NYF3 392 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 DNAJB9Q9UBS3 223 aa16.08■□□□□ 0.16
CCHCR1-210ENST00000464012 TRAV40A0A0B4J280 105 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 hCG_38984A0A1B0GV85 526 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 LGALS8O00214 317 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 TIPRLO75663 272 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 APOC1P02654 83 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 HMGN1P05114 100 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 IGHV4-38-2P0DP08 117 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 CPT2P23786 658 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 OPRL1P41146 370 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 UBA52P62987 128 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 PARP8Q8N3A8 854 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 SPERTQ8NA61 448 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 OTOSQ8NHW6 89 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 SGK3Q96BR1 496 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 MS4A7Q9GZW8 240 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 OR10A2Q9H208 303 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 NTN4Q9HB63 628 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 C14orf119Q9NWQ9 140 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 ZNF319Q9P2F9 582 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 CTSZQ9UBR2 303 aa16.07■□□□□ 0.16
CCHCR1-210ENST00000464012 PHYHO14832 338 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 PRODHO43272 600 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 ADAM20O43506 726 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 PTBP3O95758 552 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 DDOSTP39656 456 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 MZT1Q08AG7 82 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 PRSS45Q7RTY3 260 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 OR52H1Q8NGJ2 320 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 PAPOLGQ9BWT3 736 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 PPP1R3EQ9H7J1 279 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 KLHDC2Q9Y2U9 406 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 ANK2Q01484 3957 aa16.06■□□□□ 0.16
CCHCR1-210ENST00000464012 IGHV3OR15-7A0A075B7D8 119 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 OOEPA6NGQ2 149 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 GYPAP02724 150 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 EGR1P18146 543 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 CFPP27918 469 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 GNALP38405 381 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 PSMB10P40306 273 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 GSK3AP49840 483 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 POU4F2Q12837 409 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 APOFQ13790 326 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 KCNJ8Q15842 424 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 ZNF841Q6ZN19 808 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 WDR86Q86TI4 376 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 GCSAMQ8N6F7 178 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 PLPP7Q8NBV4 271 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 PAPD5Q8NDF8 572 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 DACT3Q96B18 629 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 ZNF48Q96MX3 618 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 TEX12Q9BXU0 123 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 CADM1Q9BY67 442 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 SLC25A19Q9HC21 320 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 TVP23BQ9NYZ1 205 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 ERVK-18Q9QC07 812 aa16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 SOX21Q9Y651 276 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-210ENST00000464012 TRAV38-1A0A0B4J264 116 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 TMEM89A2RUT3 159 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 DNAJC9-AS1A6NH13 148 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 C22orf46C9J442 243 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 MRPL3P09001 348 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 CFL1P23528 166 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 FGF12P61328 243 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 CSNK2BP67870 215 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 SNAPC1Q16533 368 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 SLC35D3Q5M8T2 416 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 DOK3Q7L591 496 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 LRRC29Q8WV35 223 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 UPRTQ96BW1 309 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 TTTY10Q9BZA0 68 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 RASSF4Q9H2L5 321 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 SMURF1Q9HCE7 757 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 PAPOLBQ9NRJ5 636 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 LAMP5Q9UJQ1 280 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 RHBDD3Q9Y3P4 386 aa16.04■□□□□ 0.16
CCHCR1-210ENST00000464012 KIR2DS1A0A191URI9 304 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 GSC2O15499 205 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 ENSAO43768 121 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 SLC2A5P22732 501 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 HCCSP53701 268 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 BAMBIQ13145 260 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 RHOUQ7L0Q8 258 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 KRT77Q7Z794 578 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 FAM90A1Q86YD7 464 aa16.03■□□□□ 0.16
CCHCR1-210ENST00000464012 ZNF454Q8N9F8 522 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms