RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
XRN1-203ENST00000463916 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
XRN1-203ENST00000463916 GABARAPL3Q9BY60 117 aa10.86□□□□□ -0.67
XRN1-203ENST00000463916 RIBC2Q9H4K1 309 aa10.86□□□□□ -0.67
XRN1-203ENST00000463916 METTL17Q9H7H0 456 aaPredicted RBP10.86□□□□□ -0.67
XRN1-203ENST00000463916 ADGRL4Q9HBW9 690 aa10.86□□□□□ -0.67
XRN1-203ENST00000463916 OPN4Q9UHM6 478 aa10.86□□□□□ -0.67
XRN1-203ENST00000463916 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 A0A0G2JMP0 313 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 A0A0X1KG70 313 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 LRRC30A6NM36 301 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 PPIAL4DF5H284 164 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 EBAG9O00559 213 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 DDOSTP39656 456 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 PSMA6P60900 246 aaKnown RBP10.85□□□□□ -0.67
XRN1-203ENST00000463916 ZNF404Q494X3 552 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 C11orf53Q8IXP5 236 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 DEFB108BQ8NET1 73 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 OR4M2Q8NGB6 313 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 ERGIC1Q969X5 290 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 CNN2Q99439 309 aaKnown RBP10.85□□□□□ -0.67
XRN1-203ENST00000463916 PRRG3Q9BZD7 231 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 SP140LQ9H930 580 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 FAM206AQ9NX38 181 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 ANKRD30BLA7E2S9 258 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 ALPLP05186 524 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 ROM1Q03395 351 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 OR8B8Q15620 311 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 LCN1P1Q5VSP4 162 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 SFRP4Q6FHJ7 346 aaPredicted RBP10.85□□□□□ -0.67
XRN1-203ENST00000463916 MUC20Q8N307 709 aaPredicted RBP10.85□□□□□ -0.67
XRN1-203ENST00000463916 OR8B4Q96RC9 309 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 RBM4BQ9BQ04 359 aaKnown RBP10.85□□□□□ -0.67
XRN1-203ENST00000463916 C7orf69Q9H7B7 122 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 FN3KRPQ9HA64 309 aa10.85□□□□□ -0.67
XRN1-203ENST00000463916 TMEM269A0A1B0GVZ9 245 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 FOXH1O75593 365 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 FSTL3O95633 263 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 CXCR4P61073 352 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
XRN1-203ENST00000463916 DEGS2Q6QHC5 323 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 KLBQ86Z14 1044 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 PHC2Q8IXK0 858 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 ZNF679Q8IYX0 411 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 PLPP7Q8NBV4 271 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 APOL4Q9BPW4 351 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 MROQ9BYG7 248 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 FGF23Q9GZV9 251 aaPredicted RBP10.84□□□□□ -0.67
XRN1-203ENST00000463916 RGCCQ9H4X1 137 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 NIPAL2Q9H841 368 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 C1orf123Q9NWV4 160 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 H2AFY2Q9P0M6 372 aaPredicted RBP10.84□□□□□ -0.67
XRN1-203ENST00000463916 RNF7Q9UBF6 113 aa10.84□□□□□ -0.67
XRN1-203ENST00000463916 POLR3KQ9Y2Y1 108 aaPredicted RBP10.84□□□□□ -0.67
XRN1-203ENST00000463916 NOP16Q9Y3C1 178 aaKnown RBP10.84□□□□□ -0.67
XRN1-203ENST00000463916 PPIAL4CA0A0B4J2A2 164 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 SLC22A31A6NKX4 558 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 A8MXK9 166 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 EI24O14681 340 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 APOL3O95236 402 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 IRF2P14316 349 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 PAX2Q02962 417 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 MFGE8Q08431 387 aaPredicted RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 PLEKHG7Q6ZR37 379 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 SSX6Q7RTT6 188 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 SLC35F2Q8IXU6 374 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 BOLLQ8N9W6 283 aaKnown RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 SPERTQ8NA61 448 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 OR11L1Q8NGX0 322 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 OR8S1Q8NH09 359 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 PAPOLGQ9BWT3 736 aaKnown RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 HAO2Q9NYQ3 351 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 ENOPH1Q9UHY7 261 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 J3QLI3 93 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 SRSF10O75494 262 aaKnown RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 LHBP01229 141 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 RPS2P15880 293 aaKnown RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 CD80P33681 288 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 CSNK2BP67870 215 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 POU4F2Q12837 409 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 ZIK1Q3SY52 487 aaPredicted RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 ESCO2Q56NI9 601 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 ZFP1Q6P2D0 407 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 ZNF322Q6U7Q0 402 aaPredicted RBP10.83□□□□□ -0.68
XRN1-203ENST00000463916 ZNF841Q6ZN19 808 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 GCSAMQ8N6F7 178 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 OR51G2Q8NGK0 314 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 ASB17Q8WXJ9 295 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 EME1Q96AY2 570 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 ITPKCQ96DU7 683 aa10.83□□□□□ -0.68
XRN1-203ENST00000463916 PBOV1Q9GZY1 135 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms