RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SLAMF6Q96DU3 332 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 MS4A3Q96HJ5 214 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 UQCC2Q9BRT2 126 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 HEXA-AS1Q9H8Q6 139 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 NKIRAS2Q9NYR9 191 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 ERRFI1Q9UJM3 462 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 BOKQ9UMX3 212 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 FLVCR2Q9UPI3 526 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 DOPEY2Q9Y3R5 2298 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 MYO7BQ6PIF6 2116 aa8.71□□□□□ -1.01
PTPRD-207ENST00000463477 DOPEY1Q5JWR5 2465 aa8.71□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF407Q9C0G0 2248 aa8.71□□□□□ -1.01
PTPRD-207ENST00000463477 PTPN13Q12923 2485 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 OR2M5A3KFT3 312 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF878C9JN71 531 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 H3BML4 177 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 AGFG2O95081 481 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 PMS2P2O95744 297 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 IGHG3P01860 377 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 TTRP02766 147 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 ACSM4P0C7M7 580 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 PTHLHP12272 177 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 HTR2BP41595 481 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 CA7P43166 264 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 RAD52P43351 418 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 MAGEA5P43359 124 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 GSK3AP49840 483 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF133P52736 654 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-207ENST00000463477 CLRN1P58418 232 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
PTPRD-207ENST00000463477 SNRPD2P62316 118 aaKnown RBP8.71□□□□□ -1.02
PTPRD-207ENST00000463477 SLC35A1P78382 337 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 MPPED2Q15777 294 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 TEX261Q6UWH6 196 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF813Q6ZN06 617 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 LINC00346Q8IVM7 164 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 GTPBP8Q8N3Z3 284 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-207ENST00000463477 MEIOBQ8N635 442 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 WDSUB1Q8N9V3 476 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 UXS1Q8NBZ7 420 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 OR4K17Q8NGC6 315 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 SSC4DQ8WTU2 575 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 DACT3Q96B18 629 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-207ENST00000463477 SEH1LQ96EE3 360 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM41AQ96HV5 264 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 DEFB127Q9H1M4 99 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 ACKR4Q9NPB9 350 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 UPB1Q9UBR1 384 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 SLC23A1Q9UHI7 598 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 U3KQ87 197 aa8.71□□□□□ -1.02
PTPRD-207ENST00000463477 LRRC3CA6NJW4 275 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 FAM166BA8MTA8 275 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 RGS11O94810 467 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 KDM4BO94953 1096 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 BPNT1O95861 308 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 CD74P04233 296 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 ERCC1P07992 297 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-207ENST00000463477 RFPL3SP0C7P2 107 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 GTF2F2P13984 249 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 MPZP25189 248 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 BDKRB2P30411 391 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 SELENOPP49908 381 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 CASP6P55212 293 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 POU4F3Q15319 338 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 ZMYND11Q15326 602 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 LGALSLQ3ZCW2 172 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-207ENST00000463477 OTPQ5XKR4 325 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 STEAP1BQ6NZ63 245 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 OR10S1Q8NGN2 331 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 OR2T35Q8NGX2 323 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 PSMG3-AS1Q96PY0 264 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 SLC25A21Q9BQT8 299 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-207ENST00000463477 PBOV1Q9GZY1 135 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 METTL17Q9H7H0 456 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF703Q9H7S9 590 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM138Q9NPI0 162 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 ASH1LQ9NR48 2969 aaKnown RBP8.7□□□□□ -1.02
PTPRD-207ENST00000463477 PIPOXQ9P0Z9 390 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 MGAT4CQ9UBM8 478 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 LHFPL6Q9Y693 200 aa8.7□□□□□ -1.02
PTPRD-207ENST00000463477 TRGV8A0A0C4DH27 118 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 UBE2QL1A1L167 161 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 LINC00862A6NCI5 91 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 OR14I1A6ND48 311 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 METTL21EPA6NDL7 271 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 TUBAL3A6NHL2 446 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 P2RY10O00398 339 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 PRRG2O14669 202 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 VAMP5O95183 116 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF17P17021 662 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 CCL1P22362 96 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 CTSSP25774 331 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 LSM6P62312 80 aaKnown RBP8.69□□□□□ -1.02
PTPRD-207ENST00000463477 H3F3AP84243 136 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 C6orf183Q5T699 404 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 TMPPEQ6ZT21 453 aa8.69□□□□□ -1.02
PTPRD-207ENST00000463477 FOXL2NBQ6ZUU3 175 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms