RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	GSC2	O15499	205 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	ECD	O95905	644 aa	Predicted RBP	9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLC6A6	P31641	620 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	DLX1	P56177	255 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	TPTE	P56180	551 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	POU4F2	Q12837	409 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR8B8	Q15620	311 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	BEAN1	Q3B7T3	259 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLC36A3	Q495N2	470 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	HIST2H2BD	Q6DRA6	164 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	GDPGP1	Q6ZNW5	385 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	BOLL	Q8N9W6	283 aa	Known RBP	9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR56B2P	Q8NGI1	322 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR52J3	Q8NH60	311 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	CADM1	Q9BY67	442 aa	Known RBP	9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	PPP1R3E	Q9H7J1	279 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	CNTD2	Q9H8S5	307 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	TCF7L1	Q9HCS4	588 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	TRIM36	Q9NQ86	728 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	KCNG2	Q9UJ96	466 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	VPREB3	Q9UKI3	123 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	AURKC	Q9UQB9	309 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	NOP16	Q9Y3C1	178 aa	Known RBP	9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	ERICH4	A6NGS2	130 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	BHLHE40	O14503	412 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	GSTA4	O15217	222 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	REN	P00797	406 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	PYCR1	P32322	319 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	RASSF2	P50749	326 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	MXRA7	P84157	204 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	PRB3	Q04118	309 aa	Predicted RBP	9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	KLHL12	Q53G59	568 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	WDR38	Q5JTN6	314 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	DRAM2	Q6UX65	266 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	C16orf89	Q6UX73	402 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	WDR82	Q6UXN9	313 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	PRSS45	Q7RTY3	260 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	DEFB107A	Q8IZN7	70 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	FAM216B	Q8N7L0	139 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	C8orf46	Q8TAG6	207 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	FAM110D	Q8TAY7	271 aa	Predicted RBP	9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	FAM162A	Q96A26	154 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	SEH1L	Q96EE3	360 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	AJUBA	Q96IF1	538 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	DMRTB1	Q96MA1	342 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	CDRT15	Q96T59	188 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	KCTD14	Q9BQ13	255 aa	Predicted RBP	9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	TLNRD1	Q9H1K6	362 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	NDE1	Q9NXR1	346 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	KIF17	Q9P2E2	1029 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	CD300A	Q9UGN4	299 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	COMMD3-BMI1	R4GMX3	469 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	DNAH9	Q9NYC9	4486 aa		9.15	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNF816-ZNF321P	A0A0X1KG74	233 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815		A0A1B0GVI7	797 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	TVP23A	A6NH52	213 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815		G3V4G9	280 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	ACOT8	O14734	319 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	GYG2	O15488	501 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	IDH3B	O43837	385 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	GRP	P07492	148 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	SLC2A1	P11166	492 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	SELL	P14151	372 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	NOS3	P29474	1203 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	TGM4	P49221	684 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	CSNK2B	P67870	215 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	FAM3A	P98173	230 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	KLRD1	Q13241	179 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	DNAL1	Q4LDG9	190 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	FBLN7	Q53RD9	439 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	SAMD5	Q5TGI4	173 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	STUM	Q69YW2	141 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	PGBD2	Q6P3X8	592 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	CRIP3	Q6Q6R5	217 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZDHHC21	Q8IVQ6	265 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	SPERT	Q8NA61	448 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	SCCPDH	Q8NBX0	429 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	OR1M1	Q8NGA1	313 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	OR8D4	Q8NGM9	314 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	OR2AJ1	Q8NGZ0	328 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	NPRL2	Q8WTW4	380 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	ST8SIA4	Q92187	359 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	SPTSSA	Q969W0	71 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	CCL13	Q99616	98 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	DCTN5	Q9BTE1	182 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	IFT27	Q9BW83	186 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	FGF23	Q9GZV9	251 aa	Predicted RBP	9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	DPAGT1	Q9H3H5	408 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	EGLN3	Q9H6Z9	239 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	RNPEPL1	Q9HAU8	725 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	PRPF19	Q9UMS4	504 aa	Known RBP	9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	ZNF281	Q9Y2X9	895 aa		9.14	□□□□□ -0.95
PTPN7-204	ENST00000462815	hCG_38984	A0A1B0GV85	526 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	GGT3P	A6NGU5	568 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	DNAJC8	O75937	253 aa	Predicted RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	MUC1	P15941	1255 aa	Predicted RBP	9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	EGR3	Q06889	387 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	TSPAN31	Q12999	210 aa		9.13	□□□□□ -0.95
PTPN7-204	ENST00000462815	C2orf68	Q2NKX9	166 aa		9.13	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms