RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 C19orf18Q8NEA5 215 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 OR52H1Q8NGJ2 320 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 OR5K1Q8NHB7 308 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 UTP4Q969X6 686 aaKnown RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PGAM5Q96HS1 289 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 SUCNR1Q9BXA5 334 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PRRG3Q9BZD7 231 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 OR10A2Q9H208 303 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 MMADHCQ9H3L0 296 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 BRD7Q9NPI1 651 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 RNF7Q9UBF6 113 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 MIOXQ9UGB7 285 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 KLHDC2Q9Y2U9 406 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 AUP1Q9Y679 476 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 IGHV2-70DA0A0C4DH43 119 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 hCG_1807616A0A1W2PRN6 198 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 PHYHO14832 338 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 ATP5HO75947 161 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 MRPL3P09001 348 aaKnown RBP8.5□□□□□ -1.05
SF3A3-204ENST00000462258 DDOSTP39656 456 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 DAPP51397 102 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 CRISP1P54107 249 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 FAM3AP98173 230 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 MZT1Q08AG7 82 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 APOFQ13790 326 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 KCNJ8Q15842 424 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 LCN1P1Q5VSP4 162 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 BTNL3Q6UXE8 466 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 LRRN1Q6UXK5 716 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 USP43Q70EL4 1123 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-204ENST00000462258 BOLLQ8N9W6 283 aaKnown RBP8.5□□□□□ -1.05
SF3A3-204ENST00000462258 PLPP7Q8NBV4 271 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 OR8S1Q8NH09 359 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 THEM6Q8WUY1 208 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 ZFAND2BQ8WV99 257 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 C22orf15Q8WYQ4 148 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 JMJD8Q96S16 334 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 RGCCQ9H4X1 137 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 KRT84Q9NSB2 600 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 C14orf119Q9NWQ9 140 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 C1orf123Q9NWV4 160 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 TVP23BQ9NYZ1 205 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 CLN8Q9UBY8 286 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 LAMP5Q9UJQ1 280 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 LRP12Q9Y561 859 aa8.5□□□□□ -1.05
SF3A3-204ENST00000462258 CCDC182A6NF36 153 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 C3orf80F5H4A9 247 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 M0R129 80 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 LGALS8O00214 317 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 PRKYO43930 277 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 GRPP07492 148 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 FCGR1AP12314 374 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 FASP25445 335 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 GNALP38405 381 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 GSK3AP49840 483 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 ESRRGP62508 458 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 ACTG1P63261 375 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 PAX2Q02962 417 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 PTGES3Q15185 160 aaKnown RBP8.49□□□□□ -1.05
SF3A3-204ENST00000462258 OR8B8Q15620 311 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 SNCBQ16143 134 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-204ENST00000462258 LYPD2Q6UXB3 125 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF826PQ6ZT77 177 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 WDR86Q86TI4 376 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 FTMTQ8N4E7 242 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 CSNK2A3Q8NEV1 391 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 DACT3Q96B18 629 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-204ENST00000462258 SGK3Q96BR1 496 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 TECTBQ96PL2 329 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 PAPOLGQ9BWT3 736 aaKnown RBP8.49□□□□□ -1.05
SF3A3-204ENST00000462258 GABARAPL1Q9H0R8 117 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 TRIM36Q9NQ86 728 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF319Q9P2F9 582 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 CTSZQ9UBR2 303 aa8.49□□□□□ -1.05
SF3A3-204ENST00000462258 TRAV38-1A0A0B4J264 116 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 TRAV40A0A0B4J280 105 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 OOEPA6NGQ2 149 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 ANXA2P2A6NMY6 339 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 G3V2T6 193 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 TRIM77I1YAP6 450 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 MITFO75030 526 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-204ENST00000462258 CIB2O75838 187 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 EGR1P18146 543 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 ALOX5APP20292 161 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 FPR2P25090 351 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 PSMB10P40306 273 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 CSNK2BP67870 215 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-204ENST00000462258 SLX4IPQ5VYV7 408 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 WDR25Q64LD2 544 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-204ENST00000462258 KCTD18Q6PI47 426 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-204ENST00000462258 KRT77Q7Z794 578 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 ZDHHC13Q8IUH4 622 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 GCSAMQ8N6F7 178 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 OR8B12Q8NGG6 310 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 RAB40AQ8WXH6 277 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 CNN2Q99439 309 aaKnown RBP8.48□□□□□ -1.05
SF3A3-204ENST00000462258 NUDT16L1Q9BRJ7 211 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms