RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LIPNQ5VXI9 398 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 FAM57BQ71RH2 274 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 STX19Q8N4C7 294 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 KLHL36Q8N4N3 616 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 SPERTQ8NA61 448 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF540Q8NDQ6 660 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 OR8G5Q8NG78 346 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 OR13G1Q8NGZ3 307 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 OR52N1Q8NH53 320 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 SPRYD4Q8WW59 207 aaPredicted RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 NRGNQ92686 78 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 REEP6Q96HR9 211 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 YTHDF1Q9BYJ9 559 aaKnown RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 EGLN1Q9GZT9 426 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 PBOV1Q9GZY1 135 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 CXXC4Q9H2H0 198 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 LIME1Q9H400 295 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 FKBP14Q9NWM8 211 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 MRPL15Q9P015 296 aaKnown RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 AASSQ9UDR5 926 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 GNG8Q9UK08 70 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 OR52A1Q9UKL2 312 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 MYRFQ9Y2G1 1151 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 CAB39Q9Y376 341 aaPredicted RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 MYO9AB2RTY4 2548 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 LRBAP50851 2863 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 hCG_38984A0A1B0GV85 526 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 A0A1B0GWJ7 208 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 GGT3PA6NGU5 568 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ANKRD30BLA7E2S9 258 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CD300LBA8K4G0 201 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 C17orf100A8MU93 164 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 PRR32B1ATL7 298 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 IFNL4K9M1U5 179 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 GMDSO60547 372 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 MRPS14O60783 128 aaKnown RBP7.43□□□□□ -1.22
COL28A1-205ENST00000453441 APOL3O95236 402 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CLPTM1O96005 669 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CD55P08174 381 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 HTR1AP08908 422 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ADRA2AP08913 450 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 LIMS3P0CW19 117 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 LIMS4P0CW20 117 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 SLC2A1P11166 492 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 FOSL1P15407 271 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ADMP35318 185 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CDKN1AP38936 164 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 MPV17P39210 176 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 TGM4P49221 684 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF81P51508 661 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 GBX2P52951 348 aaPredicted RBP7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ATP5J2P56134 94 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ST3GAL4Q11206 333 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 TESK1Q15569 626 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 OR8B8Q15620 311 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 KRT74Q7RTS7 529 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 SSX6Q7RTT6 188 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 NAA40Q86UY6 237 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 LRP11Q86VZ4 500 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CATSPERDQ86XM0 798 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ELMOD2Q8IZ81 293 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 RFLNBQ8N5W9 214 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 BPIFB6Q8NFQ5 453 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 OR8B12Q8NGG6 310 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 RORBQ92753 470 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 GGHQ92820 318 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 SGK3Q96BR1 496 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 C10orf35Q96D05 121 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CNBD2Q96M20 576 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 SIGLEC11Q96RL6 698 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 VRK1Q99986 396 aaPredicted RBP7.43□□□□□ -1.22
COL28A1-205ENST00000453441 SLC30A2Q9BRI3 323 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 CDCA4Q9BXL8 241 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 G6PC2Q9NQR9 355 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 TMEM100Q9NV29 134 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 FZR1Q9UM11 496 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 ERGIC3Q9Y282 383 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 PCDHGB5Q9Y5G0 923 aa7.43□□□□□ -1.22
COL28A1-205ENST00000453441 MAST4O15021 2626 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 PRRC2AP48634 2157 aaKnown RBP7.42□□□□□ -1.22
COL28A1-205ENST00000453441 A0A1B0GVI7 797 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 NDUFS8O00217 210 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 PSMD9O00233 223 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 MYL12BO14950 172 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 DHRS3O75911 302 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 IGLV3-1P01715 115 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TTRP02766 147 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ISG15P05161 165 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 CDK1P06493 297 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TNFRSF1AP19438 455 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 CCL1P22362 96 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 GNALP38405 381 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 ALDH3B1P43353 468 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 SRP9P49458 86 aaKnown RBP7.42□□□□□ -1.22
COL28A1-205ENST00000453441 TAS2R43P59537 309 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 GABARAPL2P60520 117 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 SLC35A2P78381 396 aa7.42□□□□□ -1.22
COL28A1-205ENST00000453441 FAM3AP98173 230 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms