RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NCOR1P1Q9H4R4 102 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 C5orf66Q9H5L9 145 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 PELI2Q9HAT8 420 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 RAB22AQ9UL26 194 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ZNF346Q9UL40 294 aaKnown RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 GAB2Q9UQC2 676 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 MKI67P46013 3256 aaKnown RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 KIR2DL5BA0A0G2JN68 375 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 KIR2DL5BA0A0G2JPC4 375 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 RBFOX3A6NFN3 312 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 DHRS7CA6NNS2 312 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 FTCDNL1E5RQL4 147 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 MASP2O00187 686 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 NUDT21O43809 227 aaKnown RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 GDF9O60383 454 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 AGR2O95994 175 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 NGFRP08138 427 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 GUSBP08236 651 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 NID1P14543 1247 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 CD33P20138 364 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 OR1G1P47890 313 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 REEP5Q00765 189 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ENPP2Q13822 863 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 HAGHQ16775 308 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ARHGAP11BQ3KRB8 267 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ZNF658BQ4V348 819 aaPredicted RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 C1orf194Q5T5A4 169 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 BTNL3Q6UXE8 466 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 LHFPL2Q6ZUX7 228 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 KIR2DL5AQ8N109 375 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 KREMEN2Q8NCW0 462 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 RNASE8Q8TDE3 154 aaKnown RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 GLYATL1Q969I3 302 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 RASD2Q96D21 266 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 CMKLR1Q99788 373 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 NIPSNAP3BQ9BS92 247 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 DKKL1Q9UK85 242 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ENTPD2Q9Y5L3 495 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 BORCS7-ASMTA0A0B4J1R7 106 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 MED19A0JLT2 244 aaPredicted RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 MYADML2A6NDP7 307 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 TRDCB7Z8K6 153 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 DBIP07108 87 aaKnown RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 CD52P31358 61 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 PPM1AP35813 382 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SOX8P57073 446 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SUPT4H1P63272 117 aaKnown RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 DMWDQ09019 674 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ZNF260Q3ZCT1 412 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ASPHD2Q6ICH7 369 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SLC48A1Q6P1K1 146 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 FBXO46Q6PJ61 603 aaPredicted RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 ZNF761Q86XN6 746 aaPredicted RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 OR13C3Q8NGS6 347 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 FAM213BQ8TBF2 198 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ERGIC1Q969X5 290 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 C4orf45Q96LM5 186 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SDF2Q99470 211 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 CKLFQ9UBR5 152 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 CGGBP1Q9UFW8 167 aaPredicted RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 TCFL5Q9UL49 500 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 PADI1Q9ULC6 663 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 PADI3Q9ULW8 664 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 CYP8B1Q9UNU6 501 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 MRPS18BQ9Y676 258 aaKnown RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 COLEC10Q9Y6Z7 277 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SCN5AQ14524 2016 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 A0A0B4J2E0 115 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 A0A1B0GX12 115 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 A0A1W2PPQ1 181 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 DEDDO75618 318 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 RPS2P15880 293 aaKnown RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 PI3P19957 117 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 FUT3P21217 361 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 CD82P27701 267 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 BRS3P32247 399 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 GPR3P46089 330 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SLC25A1P53007 311 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 OR5I1Q13606 314 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 WDR38Q5JTN6 314 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 TMEM225Q6GV28 225 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ULK3Q6PHR2 472 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 DPY19L2P2Q6ZN68 376 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ZNF705AQ6ZN79 300 aaPredicted RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 ZNF550Q7Z398 422 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SLC35E3Q7Z769 313 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 ZNF619Q8N2I2 560 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 PCSK9Q8NBP7 692 aaKnown RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 APCDD1LQ8NCL9 501 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 OR52E1Q8NGJ3 308 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 OR2L2Q8NH16 312 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 OR4K15Q8NH41 348 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SMARCD2Q92925 531 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 C5orf34Q96MH7 638 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 PRRX2Q99811 253 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 GINS3Q9BRX5 216 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 SH3BGRL3Q9H299 93 aa7.67□□□□□ -1.18
LSM5-208ENST00000450169 C6orf106Q9H6K1 298 aaPredicted RBP7.67□□□□□ -1.18
LSM5-208ENST00000450169 CDH20Q9HBT6 801 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms