RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RCN1Q15293 331 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 ZNF322Q6U7Q0 402 aaPredicted RBP12.29□□□□□ -0.44
USP39-206ENST00000448971 PRSS45Q7RTY3 260 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 MOGAT3Q86VF5 341 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 ZNF679Q8IYX0 411 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 ZNF420Q8TAQ5 688 aaPredicted RBP12.29□□□□□ -0.44
USP39-206ENST00000448971 RAB39BQ96DA2 213 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 RGCCQ9H4X1 137 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 LPAR2Q9HBW0 351 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 HAO2Q9NYQ3 351 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 UBAP1Q9NZ09 502 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 MRPL15Q9P015 296 aaKnown RBP12.29□□□□□ -0.44
USP39-206ENST00000448971 NPTNQ9Y639 398 aa12.29□□□□□ -0.44
USP39-206ENST00000448971 DYSFO75923 2080 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.28□□□□□ -0.44
USP39-206ENST00000448971 TMEM269A0A1B0GVZ9 245 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 PRR32B1ATL7 298 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 ZNF254O75437 659 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 IRF2P14316 349 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 GNALP38405 381 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 DDOSTP39656 456 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 CDH15P55291 814 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 FAM3AP98173 230 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 ROM1Q03395 351 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 C4orf48Q5BLP8 95 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 PRAMEF6Q5VXH4 476 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 LIPNQ5VXI9 398 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 DEGS2Q6QHC5 323 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 FTMTQ8N4E7 242 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 LINC01356Q8N9X3 169 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 OR10H4Q8NGA5 316 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 OR8S1Q8NH09 359 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 TRUB1Q8WWH5 349 aaKnown RBP12.28□□□□□ -0.44
USP39-206ENST00000448971 SGK3Q96BR1 496 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 C1orf159Q96HA4 380 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 PAPOLGQ9BWT3 736 aaKnown RBP12.28□□□□□ -0.44
USP39-206ENST00000448971 ZNF665Q9H7R5 613 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP39-206ENST00000448971 MGAM2Q2M2H8 2515 aa12.28□□□□□ -0.44
USP39-206ENST00000448971 ERICH4A6NGS2 130 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 LRRC30A6NM36 301 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 B4DSR2 109 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 IFNL4K9M1U5 179 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 GMDSO60547 372 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 CYB5R3P00387 301 aaPredicted RBP12.27□□□□□ -0.45
USP39-206ENST00000448971 KRT8P05787 483 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 ANPEPP15144 967 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 RBMXP38159 391 aaKnown RBP12.27□□□□□ -0.45
USP39-206ENST00000448971 CD200P41217 278 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 GSK3AP49840 483 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 BTG1P62324 171 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 TMED1Q13445 227 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 SNCBQ16143 134 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 LRRC36Q1X8D7 754 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 MEDAGQ5VYS4 303 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 PLEKHG7Q6ZR37 379 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 GLCCI1Q86VQ1 547 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 C1orf87Q8N0U7 546 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 ZNF555Q8NEP9 628 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 OR11L1Q8NGX0 322 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 MOB1AQ9H8S9 216 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 FAM206AQ9NX38 181 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 SMPD3Q9NY59 655 aaPredicted RBP12.27□□□□□ -0.45
USP39-206ENST00000448971 ZNF319Q9P2F9 582 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.45
USP39-206ENST00000448971 A0A1B0GWJ7 208 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 A6NLC8 198 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 LOC110117498-PIK3R3F6TDL0 507 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 MAGEB4O15481 346 aaPredicted RBP12.26□□□□□ -0.45
USP39-206ENST00000448971 ENTPD6O75354 484 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 IGHV2-70P01814 119 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 OR2T7P0C7T2 308 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 HNF1AP20823 631 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 PEX2P28328 305 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 DCTDP32321 178 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 MTNR1AP48039 350 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 EGR3Q06889 387 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 MFGE8Q08431 387 aaPredicted RBP12.26□□□□□ -0.45
USP39-206ENST00000448971 MZT1Q08AG7 82 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 MAB21L1Q13394 359 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 CR1LQ2VPA4 569 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 SSX6Q7RTT6 188 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 FAM220AQ7Z4H9 259 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 GALNT4Q8N4A0 578 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 SPICQ8N5J4 248 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 YIPF7Q8N8F6 280 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 CSNK2A3Q8NEV1 391 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 OR2T27Q8NH04 317 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 OR51F2Q8NH61 342 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 UBE2FQ969M7 185 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 SIGLEC11Q96RL6 698 aa12.26□□□□□ -0.45
USP39-206ENST00000448971 APOL4Q9BPW4 351 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms