RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RTP5Q14D33 572 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 FAM189A2Q15884 450 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 LINC00303Q3SY05 128 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ZNF260Q3ZCT1 412 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 RNFT1Q5M7Z0 435 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 GLIPR1L1Q6UWM5 242 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 CHMP1BQ7LBR1 199 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 TMEM229BQ8NBD8 167 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ACBD4Q8NC06 268 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 AKR7LQ8NHP1 331 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 FGFBP3Q8TAT2 258 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ITFG2Q969R8 447 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 APH1AQ96BI3 265 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 WDYHV1Q96HA8 205 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 IRF2BPLQ9H1B7 796 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 DEFB127Q9H1M4 99 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 RGCCQ9H4X1 137 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 LDAHQ9H6V9 325 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 CALHM2Q9HA72 323 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 MYEF2Q9P2K5 600 aaKnown RBP10.28□□□□□ -0.76
SMAD3-202ENST00000439724 SPRR3Q9UBC9 169 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 GHRLQ9UBU3 117 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 WIPF3A6NGB9 483 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 TGM6O95932 706 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 CHRM2P08172 466 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 PATE4P0C8F1 98 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 GTF2F2P13984 249 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 FAHP16930 419 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 OR3A4PP47883 348 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 CCL11P51671 97 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 TAS2R19P59542 299 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
SMAD3-202ENST00000439724 MAB21L1Q13394 359 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 FCN2Q15485 313 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 C3AR1Q16581 482 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 FAAP20Q6NZ36 180 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 CRIP3Q6Q6R5 217 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 RNF144BQ7Z419 303 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 MCEMP1Q8IX19 187 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ZNF101Q8IZC7 436 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 PNLDC1Q8NA58 520 aaKnown RBP10.28□□□□□ -0.76
SMAD3-202ENST00000439724 FDCSPQ8NFU4 85 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 KCNG3Q8TAE7 436 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 SPACA5Q96QH8 159 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 GAL3ST1Q99999 423 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 GP6Q9HCN6 339 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 NKIRAS2Q9NYR9 191 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 PAIP2BQ9ULR5 123 aaKnown RBP10.28□□□□□ -0.76
SMAD3-202ENST00000439724 PIGLQ9Y2B2 252 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ZNF175Q9Y473 711 aa10.28□□□□□ -0.76
SMAD3-202ENST00000439724 ZNF407Q9C0G0 2248 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 TMEM235A6NFC5 223 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF891A8MT65 544 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-202ENST00000439724 ARPC1BO15143 372 aaKnown RBP10.27□□□□□ -0.77
SMAD3-202ENST00000439724 ICMTO60725 284 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 IGHV3-9P01782 118 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 IGHG3P01860 377 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 C1QBP02746 253 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 LCATP04180 440 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 IL5P05113 134 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 NAT2P11245 290 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 RCVRNP35243 200 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 VEGFCP49767 419 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 RBMS2Q15434 407 aaKnown RBP10.27□□□□□ -0.77
SMAD3-202ENST00000439724 KISS1Q15726 138 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 UBE2V2Q15819 145 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 ST3GAL2Q16842 350 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 PABPC1L2AQ5JQF8 200 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 STEAP1BQ6NZ63 245 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 PLXDC2Q6UX71 529 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 Q6ZTK2 550 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF100Q8IYN0 542 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 GABRG1Q8N1C3 465 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 SEMA6DQ8NFY4 1073 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 OR10R2Q8NGX6 335 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 REEP6Q96HR9 211 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 GPER1Q99527 375 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 PRDM14Q9GZV8 571 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 LPAR5Q9H1C0 372 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 OR10A4Q9H209 315 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 TP63Q9H3D4 680 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-202ENST00000439724 NOX3Q9HBY0 568 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 FLVCR2Q9UPI3 526 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 CSAG2Q9Y5P2 127 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 ARHGAP21Q5T5U3 1957 aa10.27□□□□□ -0.77
SMAD3-202ENST00000439724 DNAJC13O75165 2243 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 MEIS3P1A6NDR6 274 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 XRCC2O43543 280 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CDC14BO60729 498 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CEACAM4O75871 244 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CD74P04233 296 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CD3DP04234 171 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 COX5BP10606 129 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 FCGR2AP12318 317 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 ACKR3P25106 362 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CLN3Q13286 438 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms