RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PNPP00491 289 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 GRPP07492 148 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 ATP6V1B1P15313 513 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 MAP2K3P46734 347 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 GSK3AP49840 483 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 HCCSP53701 268 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
MCF2L-216ENST00000439475 IL5RAQ01344 420 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 GFOD2Q3B7J2 385 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 ZNF829Q3KNS6 432 aaPredicted RBP8.81□□□□□ -1
MCF2L-216ENST00000439475 ESCO2Q56NI9 601 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 DCAF12L2Q5VW00 463 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 LIPNQ5VXI9 398 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 IL17RELQ6ZVW7 336 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 NLRC3Q7RTR2 1065 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 PRSS45Q7RTY3 260 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 SLC35F2Q8IXU6 374 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 Q8TCH9 128 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 STMN2Q93045 179 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 OR8B4Q96RC9 309 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 SIGLEC11Q96RL6 698 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 TMEM165Q9HC07 324 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 S100A14Q9HCY8 104 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 UFSP2Q9NUQ7 469 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 IMPAD1Q9NX62 359 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 DCAF16Q9NXF7 216 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 USE1Q9NZ43 259 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 LRP12Q9Y561 859 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 MPC1Q9Y5U8 109 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 TLN2Q9Y4G6 2542 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 TRAV38-1A0A0B4J264 116 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 PPIAL4CA0A0B4J2A2 164 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 IGHV3-64DA0A0J9YX35 117 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 hCG_38984A0A1B0GV85 526 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 PSMD9O00233 223 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 NDUFA2O43678 99 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 FAM20BO75063 409 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 MTRF1O75570 445 aaKnown RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 PTBP3O95758 552 aaKnown RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 OR2T7P0C7T2 308 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 RPS2P15880 293 aaKnown RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 EPHA2P29317 976 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 HTR1FP30939 366 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 POLR2IP36954 125 aaKnown RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 ALDH3A2P51648 485 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 CXCR4P61073 352 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 ROM1Q03395 351 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 EGR3Q06889 387 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 PRAMEF6Q5VXH4 476 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 MEDAGQ5VYS4 303 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 ZNF322Q6U7Q0 402 aaPredicted RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 THAP5Q7Z6K1 395 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 COMMD2Q86X83 199 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 OR8B3Q8NGG8 313 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 OR51G2Q8NGK0 314 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 OR2T27Q8NH04 317 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 FAM81AQ8TBF8 368 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 PIGCQ92535 297 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 NEIL1Q96FI4 390 aaPredicted RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 OR8B2Q96RD0 313 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 MYCBPQ99417 103 aaPredicted RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 PAPOLGQ9BWT3 736 aaKnown RBP8.8□□□□□ -1
MCF2L-216ENST00000439475 RNPEPL1Q9HAU8 725 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 CLN6Q9NWW5 311 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.8□□□□□ -1
MCF2L-216ENST00000439475 LRCH1Q9Y2L9 728 aa8.8□□□□□ -1
MCF2L-216ENST00000439475 DOCK11Q5JSL3 2073 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 MAP1AP78559 2803 aaPredicted RBP8.79□□□□□ -1
MCF2L-216ENST00000439475 A0A0U1RQV5 110 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 hCG_1807616A0A1W2PRN6 198 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 C5orf63A6NC05 138 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 CEACAM18A8MTB9 384 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 KIAA1324LA8MWY0 1029 aaPredicted RBP8.79□□□□□ -1
MCF2L-216ENST00000439475 H3BNX3 289 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 EI24O14681 340 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 BAG2O95816 211 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 CST4P01036 141 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 ALPLP05186 524 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 KRT8P05787 483 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 WNT2P09544 360 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 PMELP40967 661 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 GNB2P62879 340 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 LCN2P80188 198 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 RIPPLY1Q0D2K3 151 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 ZMYND11Q15326 602 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 OR8B8Q15620 311 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 MPPED2Q15777 294 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 ZNF404Q494X3 552 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 DCDC5Q6ZRR9 648 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 ZBTB49Q6ZSB9 765 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 ZNF771Q7L3S4 317 aaPredicted RBP8.79□□□□□ -1
MCF2L-216ENST00000439475 BCDIN3DQ7Z5W3 292 aaKnown RBP8.79□□□□□ -1
MCF2L-216ENST00000439475 PQLC1Q8N2U9 271 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 GALNT4Q8N4A0 578 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 RFLNBQ8N5W9 214 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 BOLLQ8N9W6 283 aaKnown RBP8.79□□□□□ -1
MCF2L-216ENST00000439475 OR8B12Q8NGG6 310 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 NANPQ8TBE9 248 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 TMEM158Q8WZ71 300 aa8.79□□□□□ -1
MCF2L-216ENST00000439475 HRASLS5Q96KN8 279 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms