RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 STAC2Q6ZMT1 411 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 TRAF4Q9BUZ4 470 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 KIAA1217Q5T5P2 1943 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 GJB5O95377 273 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 GP1BAP07359 652 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 COX6CP09669 75 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 OR5A2Q8NGI9 324 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 OR1L4Q8NGR5 311 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 RTN4IP1Q8WWV3 396 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 OBP2AQ9NY56 170 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 UBR2Q8IWV8 1755 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 HAND1O96004 215 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 EDN1P05305 212 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 DRD1P21728 446 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 PCP4P48539 62 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 EDDM3BP56851 147 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF252P-AS1Q0IIN9 211 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 FAM26DQ5JW98 314 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF468Q5VIY5 522 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 LEMD1Q68G75 181 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 OR5M10Q6IEU7 315 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF813Q6ZN06 617 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 CGGBP1Q9UFW8 167 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ISLRO14498 428 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 PTGFRP43088 359 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 MLF1P58340 268 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 OR8G1Q15617 311 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ACER3Q9NUN7 267 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 INTS1Q8N201 2190 aaKnown RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF98A6NK75 572 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 PABPC1L2AQ5JQF8 200 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 FOXN4Q96NZ1 517 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM167BQ9NRX6 74 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 EXOGQ9Y2C4 368 aaKnown RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 CDK5R1Q15078 307 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 C1orf140Q5VVS0 124 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 APCDD1Q8J025 514 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 MARVELD1Q9BSK0 173 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 MRPL13Q9BYD1 178 aaKnown RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 S1PR5Q9H228 398 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 PLSCR3Q9NRY6 295 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 CTSFQ9UBX1 484 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 HS3ST1O14792 307 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 FABP5Q01469 135 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 RIGQ13278 110 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 CALHM3Q86XJ0 350 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 OR4F17Q8NGA8 305 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 MARCH1Q8TCQ1 289 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 WASHC3Q9Y3C0 194 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 POLR2AP24928 1970 aaKnown RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 YOD1Q5VVQ6 348 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-209ENST00000437951 TRAT1Q6PIZ9 186 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 MDGA1Q8NFP4 955 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 ELOVL1Q9BW60 279 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
PTCH1-209ENST00000437951 FITM1A5D6W6 292 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 KLF7O75840 302 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 FOXB2Q5VYV0 432 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM174Q8WUU8 243 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 PIGTQ969N2 578 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 CABIN1Q9Y6J0 2220 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 M0QZ24 198 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 SSX1Q16384 188 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 EID2BQ96D98 161 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 BANF2Q9H503 90 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 UBE2ZQ9H832 354 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 IL17BQ9UHF5 180 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 CORTO00230 105 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 MFNGO00587 321 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 SLC10A3P09131 477 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 ASCL1P50553 236 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 SRSF9Q13242 221 aaKnown RBP eCLIP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF789Q5FWF6 425 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 LIPNQ5VXI9 398 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM81Q6P7N7 255 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM204Q9BSN7 226 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TIMM10BQ9Y5J6 103 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 A0A0A6YYC8 382 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 I3L1I5 382 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 SIAH2O43255 324 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 POLR2IP36954 125 aaKnown RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 GALMQ96C23 342 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 TIMD4Q96H15 378 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 PARD6GQ9BYG4 376 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 CHST11Q9NPF2 352 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 ANKRD61A6NGH8 418 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 GPR37O15354 613 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 SRP14P37108 136 aaKnown RBP10.47□□□□□ -0.73
PTCH1-209ENST00000437951 LIMK1P53667 647 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 FAHD1Q6P587 224 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 LINC00346Q8IVM7 164 aa10.47□□□□□ -0.73
PTCH1-209ENST00000437951 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms