RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SLC16A14Q7RTX9 510 aa22.49■■□□□ 1.19
CPNE1-216ENST00000437340 TMEM178AQ8NBL3 297 aa22.49■■□□□ 1.19
CPNE1-216ENST00000437340 AQP3Q92482 292 aa22.49■■□□□ 1.19
CPNE1-216ENST00000437340 BCO1Q9HAY6 547 aa22.49■■□□□ 1.19
CPNE1-216ENST00000437340 MYEF2Q9P2K5 600 aaKnown RBP22.49■■□□□ 1.19
CPNE1-216ENST00000437340 CELSR3Q9NYQ7 3312 aa22.49■■□□□ 1.19
CPNE1-216ENST00000437340 A0A1B0GUH1 482 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ICMTO60725 284 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 FARS2O95363 451 aaKnown RBP22.48■■□□□ 1.19
CPNE1-216ENST00000437340 HCKP08631 526 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 UBBP0CG47 229 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 GTF2F2P13984 249 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ERP29P30040 261 aaKnown RBP22.48■■□□□ 1.19
CPNE1-216ENST00000437340 FAM189A2Q15884 450 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 MOGAT2Q3SYC2 334 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 TSPO2Q5TGU0 170 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 TMEM229BQ8NBD8 167 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ITFG2Q969R8 447 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 MED30Q96HR3 178 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 OR10A4Q9H209 315 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF552Q9H707 407 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-216ENST00000437340 MRPS28Q9Y2Q9 187 aaKnown RBP22.48■■□□□ 1.19
CPNE1-216ENST00000437340 IGKV1-9A0A0C4DH69 117 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 RPL36A-HNRNPH2H7BZ11 118 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 TAS2R19P59542 299 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 RBMS2Q15434 407 aaKnown RBP22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ST3GAL2Q16842 350 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF260Q3ZCT1 412 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF766Q5HY98 468 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 METTL11BQ5VVY1 283 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 FAAP20Q6NZ36 180 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 GAL3ST1Q99999 423 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 OR2H1Q9GZK4 316 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 CHST5Q9GZS9 411 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 EXO5Q9H790 373 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 GHRLQ9UBU3 117 aa22.48■■□□□ 1.19
CPNE1-216ENST00000437340 CHRM2P08172 466 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 SPINK2P20155 84 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 SDHBP21912 280 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 GZMKP49863 264 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 PSG4Q00888 419 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 RNPS1Q15287 305 aaKnown RBP22.47■■□□□ 1.19
CPNE1-216ENST00000437340 GLIPR1L1Q6UWM5 242 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF782Q6ZMW2 699 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-216ENST00000437340 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-216ENST00000437340 ACBD4Q8NC06 268 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 KCNG3Q8TAE7 436 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF391Q9UJN7 358 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 FLVCR2Q9UPI3 526 aa22.47■■□□□ 1.19
CPNE1-216ENST00000437340 ARPC1BO15143 372 aaKnown RBP22.46■■□□□ 1.19
CPNE1-216ENST00000437340 MELTFP08582 738 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 WT1P19544 449 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-216ENST00000437340 RCVRNP35243 200 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 VEGFCP49767 419 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 CLN3Q13286 438 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 STEAP1BQ6NZ63 245 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF101Q8IZC7 436 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 PNLDC1Q8NA58 520 aaKnown RBP22.46■■□□□ 1.19
CPNE1-216ENST00000437340 CAPSLQ8WWF8 208 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 SGK3Q96BR1 496 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 C1orf147Q96MC9 270 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-216ENST00000437340 PRRG4Q9BZD6 226 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 ZNF224Q9NZL3 707 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 SPTBN2O15020 2390 aa22.46■■□□□ 1.19
CPNE1-216ENST00000437340 IL5P05113 134 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 SNAI3Q3KNW1 292 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 SKA3Q8IX90 412 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 TUSC5Q8IXB3 177 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 GABRG1Q8N1C3 465 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 FNDC9Q8TBE3 224 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 WNT5BQ9H1J7 359 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 ATPIF1Q9UII2 106 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 PIGLQ9Y2B2 252 aa22.45■■□□□ 1.19
CPNE1-216ENST00000437340 CD3DP04234 171 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 ITGB2P05107 769 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 ALDH3B1P43353 468 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 HTR5AP47898 357 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 Q6ZTK2 550 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.45■■□□□ 1.18
CPNE1-216ENST00000437340 SPACA5Q96QH8 159 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 GPER1Q99527 375 aa22.45■■□□□ 1.18
CPNE1-216ENST00000437340 MEIS3P1A6NDR6 274 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 NKX2-8O15522 239 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 MMP7P09237 267 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-216ENST00000437340 SULT1A3P0DMM9 295 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 SULT1A4P0DMN0 295 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 OR3A4PP47883 348 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 FAPQ12884 760 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 GLDNQ6ZMI3 551 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-216ENST00000437340 OR11H7Q8NGC8 314 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 OR10R2Q8NGX6 335 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 DACT3Q96B18 629 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-216ENST00000437340 RGCCQ9H4X1 137 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 SLC7A10Q9NS82 523 aa22.44■■□□□ 1.18
CPNE1-216ENST00000437340 FAM172BPA6NC97 362 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 TMEM235A6NFC5 223 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 CYB5AP00167 134 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 ANXA3P12429 323 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 FAHP16930 419 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 KISS1Q15726 138 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms