RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TMEM17Q86X19 198 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 GVQW1Q8N7I0 195 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 THAP6Q8TBB0 222 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 SSC4DQ8WTU2 575 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 PP6455Q8WZ26 134 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 C1orf147Q96MC9 270 aaPredicted RBP9.2□□□□□ -0.94
CD44-210ENST00000434472 CDC6Q99741 560 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 ZNF416Q9BWM5 594 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 NARFLQ9H6Q4 476 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.2□□□□□ -0.94
CD44-210ENST00000434472 SHPKQ9UHJ6 478 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 FBXO4Q9UKT5 387 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 KCNK7Q9Y2U2 307 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 V9GYS6 101 aa9.2□□□□□ -0.94
CD44-210ENST00000434472 CACNA1CQ13936 2221 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 EFSO43281 561 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 BCL2L11O43521 198 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 RAMP1O60894 148 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 CA11O75493 328 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 MTRF1O75570 445 aaKnown RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 CBR3O75828 277 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 CER1O95813 267 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 CFIP05156 583 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 UMODP07911 640 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 SLC2A1P11166 492 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 POU3F2P20265 443 aaPredicted RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 OR3A4PP47883 348 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 RAC1P63000 192 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 HYAL4Q2M3T9 481 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 PEAR1Q5VY43 1037 aaPredicted RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 RAET1LQ5VY80 246 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 OR52W1Q6IF63 320 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 ACOT7LQ6ZUV0 252 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 OVCH2Q7RTZ1 564 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 RPS19BP1Q86WX3 136 aaKnown RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 EIF4E3Q8N5X7 224 aaKnown RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 TMEM156Q8N614 296 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 OR2Y1Q8NGV0 311 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 TERB2Q8NHR7 220 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 FBXW5Q969U6 566 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 SPTSSAQ969W0 71 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 PHYHIPLQ96FC7 376 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 WBP1Q96G27 269 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 PIGQQ9BRB3 760 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 SF3B5Q9BWJ5 86 aaKnown RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 OR10A2Q9H208 303 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 HPF1Q9NWY4 346 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 ARID1BQ8NFD5 2236 aaPredicted RBP9.19□□□□□ -0.94
CD44-210ENST00000434472 ALPK2Q86TB3 2170 aa9.19□□□□□ -0.94
CD44-210ENST00000434472 NSG1A0A0A6YYJ2 146 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 CEACAM18A8MTB9 384 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 SOCS1O15524 211 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 CRTAPO75718 401 aaPredicted RBP9.18□□□□□ -0.94
CD44-210ENST00000434472 DHRS3O75911 302 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 PMP2P02689 132 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 HOXD11P31277 338 aaPredicted RBP9.18□□□□□ -0.94
CD44-210ENST00000434472 DLSTP36957 453 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 NUP62P37198 522 aaPredicted RBP9.18□□□□□ -0.94
CD44-210ENST00000434472 FOLR3P41439 243 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 MLF1P58340 268 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 TAS2R46P59540 309 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 ZFP36L1Q07352 338 aaKnown RBP9.18□□□□□ -0.94
CD44-210ENST00000434472 ENDOGQ14249 297 aaKnown RBP9.18□□□□□ -0.94
CD44-210ENST00000434472 NSUN5P2Q63ZY6 315 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 C17orf107Q6ZR85 190 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 ARMC10Q8N2F6 343 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 FAM89BQ8N5H3 189 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 TMEM185AQ8NFB2 350 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 OR9K2Q8NGE7 335 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 OR5H2Q8NGV7 314 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 KCNE4Q8WWG9 221 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 ST8SIA2Q92186 375 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 ST8SIA4Q92187 359 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 MRGPRFQ96AM1 343 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 S100A13Q99584 98 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 NICN1Q9BSH3 213 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 PPA2Q9H2U2 334 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 AKIRIN1Q9H9L7 192 aaPredicted RBP9.18□□□□□ -0.94
CD44-210ENST00000434472 SH2D2AQ9NP31 389 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 ZNF319Q9P2F9 582 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 GLS2Q9UI32 602 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 FLVCR1Q9Y5Y0 555 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 HS3ST3B1Q9Y662 390 aa9.18□□□□□ -0.94
CD44-210ENST00000434472 A0A0A6YYD4 124 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 OR2AT4A6NND4 320 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 A8MXK9 166 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 MFNGO00587 321 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 ZIC3O60481 467 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 SPDEFO95238 335 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 WDPCPO95876 746 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 FGF2P09038 288 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 CCL3P10147 92 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 NAT2P11245 290 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 AKR1C4P17516 323 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 VAMP1P23763 118 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 PTGFRP43088 359 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 OR3A2P47893 321 aa9.17□□□□□ -0.94
CD44-210ENST00000434472 MRPS34P82930 218 aaKnown RBP9.17□□□□□ -0.94
CD44-210ENST00000434472 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms