RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SAMD10Q9BYL1 202 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TSGA10Q9BZW7 698 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SLIRPQ9GZT3 109 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 FGF23Q9GZV9 251 aaPredicted RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 IL22Q9GZX6 179 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 DEFB129Q9H1M3 183 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 ANKRA2Q9H9E1 313 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 C8orf17Q9NRJ1 99 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 C21orf62Q9NYP8 219 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 MYEF2Q9P2K5 600 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 SLC17A7Q9P2U7 560 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 RCL1Q9Y2P8 373 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 CABIN1Q9Y6J0 2220 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 CAMTA1Q9Y6Y1 1673 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 KIF26AQ9ULI4 1882 aaPredicted RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 IGHV3OR16-8A0A075B7F1 116 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 A0A1B0GW55 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 A0A1W2PRF3 423 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 A0A1W2PRM7 423 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 CENPXA8MT69 81 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 BTNL10A8MVZ5 291 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 GOLGA8TH3BQL2 631 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 ZNF701M0R085 212 aaPredicted RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 NME4O00746 187 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 BCKDKO14874 412 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 ERI3O43414 337 aaKnown RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 GATCO43716 136 aaKnown RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 TTC4O95801 387 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 CD160O95971 181 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 DUX4L2P0CJ85 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 DUX4L3P0CJ86 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 DUX4L5P0CJ88 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 DUX4L6P0CJ89 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 DUX4L7P0CJ90 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 PGA5P0DJD9 388 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 RNASE2P10153 161 aaKnown RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 SFTPCP11686 197 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 CSNK2A2P19784 350 aaPredicted RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 MSR1P21757 451 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 CD82P27701 267 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 HTR2BP41595 481 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 GPR1P46091 355 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 GALR1P47211 349 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 SPAG1Q07617 926 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 SLC25A35Q3KQZ1 300 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 MRPL2Q5T653 305 aaKnown RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 DNAJC24Q6P3W2 148 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 TMEM205Q6UW68 189 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 Q6ZSR6 202 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 KATNAL2Q8IYT4 538 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 OSR2Q8N2R0 312 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 MIR7-3HGQ8N6C7 128 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 TMEM105Q8N8V8 129 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 OR5T1Q8NG75 326 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 OR2Z1Q8NG97 314 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 OR6K6Q8NGW6 343 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 OR52N1Q8NH53 320 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 CDS1Q92903 461 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 Q96MT0 163 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 RDH12Q96NR8 316 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 ZNF317Q96PQ6 595 aaPredicted RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 TMEM243Q9BU79 118 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 SLC7A5P2Q9GIP4 190 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 FANCEQ9HB96 536 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 SLC38A10Q9HBR0 1119 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 C6orf50Q9HD87 102 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 RETNQ9HD89 108 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 FBXO6Q9NRD1 293 aaPredicted RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 ADA2Q9NZK5 511 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 PEF1Q9UBV8 284 aaKnown RBP1.16□□□□□ -2.22
CDC40-204ENST00000431461 DUX4Q9UBX2 424 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 TBC1D24Q9ULP9 559 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 SIGLEC9Q9Y336 463 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 LRRC42Q9Y546 428 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 PLEKHG2Q9H7P9 1386 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 PCM1Q15154 2024 aa1.16□□□□□ -2.22
CDC40-204ENST00000431461 AQRO60306 1485 aaKnown RBP eCLIP1.16□□□□□ -2.22
CDC40-204ENST00000431461 UBN2Q6ZU65 1347 aa1.15□□□□□ -2.22
CDC40-204ENST00000431461 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.15□□□□□ -2.22
CDC40-204ENST00000431461 SCN1AP35498 2009 aa1.15□□□□□ -2.22
CDC40-204ENST00000431461 IGKV2-24A0A0C4DH68 120 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 ISPDA4D126 451 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 OR2AG2A6NM03 316 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 NDUFC2-KCTD14E9PQ53 114 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 PRAMEF26H0Y7S4 382 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 PLPP1O14494 284 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 SLC9A3R1O14745 358 aaPredicted RBP1.15□□□□□ -2.23
CDC40-204ENST00000431461 POLR1CO15160 346 aaPredicted RBP1.15□□□□□ -2.23
CDC40-204ENST00000431461 TCAPO15273 167 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 EIF3HO15372 352 aaKnown RBP eCLIP1.15□□□□□ -2.23
CDC40-204ENST00000431461 MPDU1O75352 247 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 CTAG2O75638 210 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 IGLV7-43P04211 117 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 RPN2P04844 631 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 CD5P06127 495 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 IGKV4-1P06312 121 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 FGF4P08620 206 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 KRT16P08779 473 aa1.15□□□□□ -2.23
CDC40-204ENST00000431461 MMP7P09237 267 aaPredicted RBP1.15□□□□□ -2.23
CDC40-204ENST00000431461 SLC35G6P0C7Q6 338 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms