RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PPIAL4CA0A0B4J2A2 164 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PRSS38A1L453 326 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MBLAC1A4D2B0 266 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 RIIAD1A6NNX1 92 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PLPP3O14495 311 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CNMDO75829 334 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 STBD1O95210 358 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 S1PR4O95977 384 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PPIAL4GP0DN37 164 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HSD17B1P14061 328 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FCGR2BP31994 310 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PIGAP37287 484 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 RPL3P39023 403 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF133P52736 654 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PPP1CAP62136 330 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 JOSD1Q15040 202 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PSG3Q16557 428 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 C3AR1Q16581 482 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HLA-BQ31612 363 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SPANXN3Q5MJ09 141 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 UNQ9370/PRO34162Q6UXP9 181 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 TCF24Q7RTU0 167 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 DEFB128Q7Z7B8 93 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CHST4Q8NCG5 386 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OR1B1Q8NGR6 318 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OR1L8Q8NGR8 309 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 UCN3Q969E3 161 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 LRRC58Q96CX6 371 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PGLYRP3Q96LB9 341 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PAAF1Q9BRP4 392 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FGFBP2Q9BYJ0 223 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 LIN7CQ9NUP9 197 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 LSM7Q9UK45 103 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SPIN1Q9Y657 262 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MYO3AQ8NEV4 1616 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 A0A1W2PR80 420 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM129A0AVI4 362 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 FOXH1O75593 365 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 UMODP07911 640 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SPINK8P0C7L1 97 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 HOXB2P14652 356 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CD58P19256 250 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 PRTN3P24158 256 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SULT1A1P50225 295 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CCL11P51671 97 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 MRPS34P82930 218 aaKnown RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 ROM1Q03395 351 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SPATA46Q5T0L3 261 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SPATA31B1PQ5VZV4 182 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 APOBEC3FQ8IUX4 373 aaKnown RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF611Q8N823 705 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 NPEPL1Q8NDH3 523 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 PIGCQ92535 297 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 IL22RA2Q969J5 263 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SULT4A1Q9BR01 284 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 C1QTNF4Q9BXJ3 329 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 GCM1Q9NP62 436 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TMEFF2Q9UIK5 374 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 WIPI2Q9Y4P8 454 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 MED14O60244 1454 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 LRRC7Q96NW7 1537 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 MPDZO75970 2070 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 LOC100289279A0A1B0GTE1 492 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 LRP5LA4QPB2 252 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM8BA6NDV4 472 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 EIF4E2O60573 245 aaKnown RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TNFSF15O95150 251 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 NGFP01138 241 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 GCGP01275 180 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 ORM1P02763 201 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 COX7A2P14406 83 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 GPD1P21695 349 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 NME2P22392 152 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CD38P28907 300 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 OPRD1P41143 372 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 PRLHRP49683 370 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 GFRA1P56159 465 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 RELBQ01201 579 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CTU2Q2VPK5 515 aaKnown RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 FAM174BQ3ZCQ3 159 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CXorf66Q5JRM2 361 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TCTN3Q6NUS6 607 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 DHRS13Q6UX07 377 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF66Q6ZN08 573 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 H2BFWTQ7Z2G1 175 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SLC35E3Q7Z769 313 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM151AQ8N4L1 468 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 GGHQ92820 318 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 ZC2HC1AQ96GY0 325 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TAPBPLQ9BX59 468 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 WDCPQ9H6R7 721 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SH2D2AQ9NP31 389 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 KCNJ16Q9NPI9 418 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 COMMD9Q9P000 198 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CHST2Q9Y4C5 530 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 MED1Q15648 1581 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 FOXI3A8MTJ6 420 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 PRR33A8MZF0 331 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms