RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 OR51I2Q9H344 312 aa13.88□□□□□ -0.19
PTPRF-206ENST00000429895 PLEKHB1Q9UF11 243 aaPredicted RBP13.88□□□□□ -0.19
PTPRF-206ENST00000429895 KPTNQ9Y664 436 aa13.88□□□□□ -0.19
PTPRF-206ENST00000429895 ZXDAP98168 799 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 C4orf17Q53FE4 359 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 FAM26EQ8N5C1 309 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 CLEC18AA5D8T8 446 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 B3GALNT1O75752 331 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 JTBO76095 146 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 METAP1P53582 386 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 RPUSD3Q6P087 351 aaKnown RBP13.87□□□□□ -0.19
PTPRF-206ENST00000429895 CLEC18CQ8NCF0 446 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 ADPRHL1Q8NDY3 354 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 PELI1Q96FA3 418 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 GAR1Q9NY12 217 aaKnown RBP13.87□□□□□ -0.19
PTPRF-206ENST00000429895 C5P01031 1676 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 M0R1X1 148 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 EDIL3O43854 480 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 TMPRSS11FQ6ZWK6 438 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 CCL17Q92583 94 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 AUNIPQ9H7T9 357 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 HDGFL3Q9Y3E1 203 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 GLULP15104 373 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 ATF1P18846 271 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 POU3F3P20264 500 aaPredicted RBP13.87□□□□□ -0.19
PTPRF-206ENST00000429895 MPGP29372 298 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 GPR3P46089 330 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 ST8SIA2Q92186 375 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 POM121L2Q96KW2 1035 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 TEX101Q9BY14 249 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 NKX6-2Q9C056 277 aaPredicted RBP13.87□□□□□ -0.19
PTPRF-206ENST00000429895 SPTY2D1-AS1A0A0U1RR47 76 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 G3V3Q6 166 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 MT-CO3P00414 261 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 LALBAP00709 142 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 GIPP09681 153 aaPredicted RBP13.87□□□□□ -0.19
PTPRF-206ENST00000429895 COX5AP20674 150 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 MPLP40238 635 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 FABP5Q01469 135 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 LRRTM1Q86UE6 522 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 OR5M8Q8NGP6 311 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 KTI12Q96EK9 354 aaPredicted RBP13.87□□□□□ -0.19
PTPRF-206ENST00000429895 B9D1Q9UPM9 204 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 NPTNQ9Y639 398 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
PTPRF-206ENST00000429895 A0A1W2PRD5 423 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 A0A1W2PRF3 423 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 A0A1W2PRM7 423 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 ADAM10O14672 748 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 TAAR5O14804 337 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 COX7A1P24310 79 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 FUT6P51993 359 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 PTTG1IPP53801 180 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 FAM53BQ14153 422 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 OR2A2Q6IF42 318 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 UBE3DQ7Z6J8 389 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 GNRHR2Q96P88 292 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 ZAR1LA6NP61 321 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 SULT1C4O75897 302 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 TNFRSF1AP19438 455 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 PDZK1IP1Q13113 114 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 SIGLECL1Q8N7X8 197 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 EDARADDQ8WWZ3 215 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 SLC25A32Q9H2D1 315 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 SPNS1Q9H2V7 528 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 FSCN3Q9NQT6 498 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 MYO18AQ92614 2054 aaKnown RBP13.86□□□□□ -0.19
PTPRF-206ENST00000429895 SNCGO76070 127 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 ISL1P61371 349 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 DHODHQ02127 395 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 FABP9Q0Z7S8 132 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 OR2A1Q8NGT9 310 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 OR8B4Q96RC9 309 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 P4HTMQ9NXG6 502 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 E5RGE8 158 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 LMO7DNF2Z398 122 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 ONECUT2O95948 504 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 PSMB6P28072 239 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 TPBGQ13641 420 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 GALNT16Q8N428 558 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 WDR31Q8NA23 367 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 OR2M7Q8NG81 312 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 APOBEC3DQ96AK3 386 aaPredicted RBP13.86□□□□□ -0.19
PTPRF-206ENST00000429895 CIB3Q96Q77 187 aaPredicted RBP13.86□□□□□ -0.19
PTPRF-206ENST00000429895 NSG2Q9Y328 171 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 LRRC3CA6NJW4 275 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 OR4E1P0C645 316 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 HYAL1Q12794 435 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 ACOT7LQ6ZUV0 252 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 SMIM19Q96E16 107 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 NAGKQ9UJ70 344 aa13.86□□□□□ -0.19
PTPRF-206ENST00000429895 ATP6V1G2-DDX39BF2Z307 99 aa13.85□□□□□ -0.19
PTPRF-206ENST00000429895 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
PTPRF-206ENST00000429895 ZNF17P17021 662 aa13.85□□□□□ -0.19
PTPRF-206ENST00000429895 MRPL58Q14197 206 aaKnown RBP13.85□□□□□ -0.19
PTPRF-206ENST00000429895 VMA21Q3ZAQ7 101 aa13.85□□□□□ -0.19
PTPRF-206ENST00000429895 OR2T2Q6IF00 324 aa13.85□□□□□ -0.19
PTPRF-206ENST00000429895 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
PTPRF-206ENST00000429895 OR1F12Q8NHA8 337 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms