RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 Q9H521 79 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 FGF20Q9NP95 211 aaPredicted RBP12.38□□□□□ -0.43
SGCE-204ENST00000428696 NUFIP1Q9UHK0 495 aaKnown RBP12.38□□□□□ -0.43
SGCE-204ENST00000428696 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 A6NIN4 97 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 IGHA1P01876 353 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 TTRP02766 147 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 DDOSTP39656 456 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 MAP2K3P46734 347 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 DSCR9P59020 149 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 MVKQ03426 396 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 HFEQ30201 348 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 SPRNQ5BIV9 151 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 FAM209AQ5JX71 171 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ELMOD2Q8IZ81 293 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 RDH10Q8IZV5 341 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ZNF786Q8N393 782 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 KLHL36Q8N4N3 616 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 OR8S1Q8NH09 359 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 SPSB4Q96A44 273 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 HIST1H2AAQ96QV6 131 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 OR2V2Q96R30 315 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ADAT1Q9BUB4 502 aaKnown RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 MOB1AQ9H8S9 216 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 G6PC2Q9NQR9 355 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 CLEC2DQ9UHP7 191 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 PSORS1C1Q9UIG5 152 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 RAB26Q9ULW5 256 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 OTOGQ6ZRI0 2925 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 A0A0U1RQV5 110 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 hCG_38984A0A1B0GV85 526 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 A0A1B0GVI7 797 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 LOC390937A0A1W2PQ73 354 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 MTRF1O75570 445 aaKnown RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 GRPP07492 148 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 SRP9P49458 86 aaKnown RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 CSNK2BP67870 215 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 TESK1Q15569 626 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 WDR38Q5JTN6 314 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 OR2G6Q5TZ20 316 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 KCTD8Q6ZWB6 473 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 CATSPERDQ86XM0 798 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 KRTAP1-3Q8IUG1 177 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 FTMTQ8N4E7 242 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ZNF676Q8N7Q3 588 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 MAPK1IP1LQ8NDC0 245 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 CSNK2A3Q8NEV1 391 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 SEMA6DQ8NFY4 1073 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 FBLIM1Q8WUP2 373 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 GATAD2BQ8WXI9 593 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 PELI1Q96FA3 418 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 CCDC90BQ9GZT6 254 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 PPP1R3EQ9H7J1 279 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 NKIRAS2Q9NYR9 191 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ZNF391Q9UJN7 358 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 DIMT1Q9UNQ2 313 aaKnown RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
SGCE-204ENST00000428696 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
SGCE-204ENST00000428696 ZNF850A8MQ14 1090 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 E9PI62 339 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 H7C1Q1 480 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 SLC1A7O00341 560 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 MLNRO43193 412 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 SYT7O43581 403 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 SRSF10O75494 262 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 TNFRSF1AP19438 455 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 EEF1B2P24534 225 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 RBMXP38159 391 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 HNRNPA0Q13151 305 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 DMRTC1Q5HYR2 192 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 MOB3CQ70IA8 216 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 PRSS35Q8N3Z0 413 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 OR2G2Q8NGZ5 317 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 MYDGFQ969H8 173 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 YIPF5Q969M3 257 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 SLC22A4Q9H015 551 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 NARFLQ9H6Q4 476 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 MYOZ1Q9NP98 299 aaPredicted RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 PLCXD1Q9NUJ7 323 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 UFSP2Q9NUQ7 469 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 CNOT2Q9NZN8 540 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 MRPL15Q9P015 296 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 FRRS1LQ9P0K9 344 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 IL19Q9UHD0 177 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms