RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 K7EM74 188 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 IL18BPO95998 194 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 VSIG8P0DPA2 414 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 PRF1P14222 555 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 ACKR3P25106 362 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 MPGP29372 298 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 DMRTC1Q5HYR2 192 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 SEMA6DQ8NFY4 1073 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 NPAP1Q9NZP6 1156 aa23.06■■□□□ 1.28
LDB1-202ENST00000425280 LOC100509620A0A075B734 347 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 DHRS7CA6NNS2 312 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 ALX3O95076 343 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 ECDO95905 644 aaPredicted RBP23.05■■□□□ 1.28
LDB1-202ENST00000425280 MT-ND4P03905 459 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 OR3A4PP47883 348 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 FGD2Q7Z6J4 655 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 WASF3Q9UPY6 502 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 MRPS28Q9Y2Q9 187 aaKnown RBP23.05■■□□□ 1.28
LDB1-202ENST00000425280 CD79AP11912 226 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 SNTB2Q13425 540 aaKnown RBP23.05■■□□□ 1.28
LDB1-202ENST00000425280 TNK1Q13470 666 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 OR1K1Q8NGR3 316 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 C1QTNF5Q9BXJ0 243 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 ZNF391Q9UJN7 358 aa23.05■■□□□ 1.28
LDB1-202ENST00000425280 A0A0A6YYH2 397 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 ANKRD20A5PA0PJZ0 165 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 A6NJ64 397 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 RANBP1P43487 201 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 MOGAT2Q3SYC2 334 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 CRIP3Q6Q6R5 217 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 GCNT2Q8N0V5 402 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 RBMXL3Q8N7X1 1067 aaKnown RBP23.04■■□□□ 1.28
LDB1-202ENST00000425280 NPRL2Q8WTW4 380 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 CREB3L1Q96BA8 519 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 RGCCQ9H4X1 137 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 FBLN5Q9UBX5 448 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 COX5BP10606 129 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 EDN3P14138 238 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 ARR3P36575 388 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 AP3S2P59780 193 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 GUCA2AQ02747 115 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 GUSBP1Q15486 140 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 GLIPR1L1Q6UWM5 242 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 AKAP14Q86UN6 197 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 ITFG2Q969R8 447 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 FAM46BQ96A09 425 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 C1orf147Q96MC9 270 aaPredicted RBP23.04■■□□□ 1.28
LDB1-202ENST00000425280 DPAGT1Q9H3H5 408 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 HRASLSQ9HDD0 168 aa23.04■■□□□ 1.28
LDB1-202ENST00000425280 SPTBN2O15020 2390 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 TMEM14DPA8MWL7 114 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 H7C417 338 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 GSTT2BP0CG30 244 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 GIFP27352 417 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 RAB1AP62820 205 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 ZNF92Q03936 586 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 RIPPLY1Q0D2K3 151 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 COLCA1Q6ZS62 124 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 BCL2L2Q92843 193 aaPredicted RBP23.03■■□□□ 1.28
LDB1-202ENST00000425280 GPER1Q99527 375 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 MTFP1Q9UDX5 166 aa23.03■■□□□ 1.28
LDB1-202ENST00000425280 PRSS3P35030 304 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 PRSS12P56730 875 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 KISS1Q15726 138 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 TATDN3Q17R31 274 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 HIKESHIQ53FT3 197 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 TMEM53Q6P2H8 277 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 TFAP2EQ6VUC0 442 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 FAM214BQ7L5A3 538 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 ACBD4Q8NC06 268 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 METTL21EPA6NDL7 271 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 ZNF101Q8IZC7 436 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 CACNG6Q9BXT2 260 aa23.02■■□□□ 1.28
LDB1-202ENST00000425280 hCG_38984A0A1B0GV85 526 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 INMT-MINDY4F8WBC2 141 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 RBBP9O75884 186 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 STOMP27105 288 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 GSK3AP49840 483 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 CCR6P51684 374 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 FAM3AP98173 230 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 TMEM255AQ5JRV8 349 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 SPACA3Q8IXA5 215 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 C9orf106Q8NAJ2 232 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 WNT2BQ93097 391 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 GPR173Q9NS66 373 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 DCHS1Q96JQ0 3298 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 XRCC2O43543 280 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 CCL2P13500 99 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 OR2W3Q7Z3T1 314 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 AKAP1Q92667 903 aaKnown RBP eCLIP23.01■■□□□ 1.271e-11■■■□□ 17.3
LDB1-202ENST00000425280 SPSB4Q96A44 273 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 LHX6Q9UPM6 363 aa23.01■■□□□ 1.27
LDB1-202ENST00000425280 C5orf49A4QMS7 147 aa23■■□□□ 1.27
LDB1-202ENST00000425280 RAB27BO00194 218 aa23■■□□□ 1.27
LDB1-202ENST00000425280 GMDSO60547 372 aa23■■□□□ 1.27
LDB1-202ENST00000425280 TCRBP04435 133 aa23■■□□□ 1.27
LDB1-202ENST00000425280 ACSF3Q4G176 576 aaPredicted RBP23■■□□□ 1.27
LDB1-202ENST00000425280 RAB12Q6IQ22 244 aa23■■□□□ 1.27
LDB1-202ENST00000425280 GPX8Q8TED1 209 aa23■■□□□ 1.27
LDB1-202ENST00000425280 PIGTQ969N2 578 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms