RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RANBP3Q9H6Z4 567 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 LRFN1Q9P244 771 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 GTF3C1Q12789 2109 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 UBE2QL1A1L167 161 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 NTN3O00634 580 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 NUPL2O15504 423 aaKnown RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 KNG1P01042 644 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 OR4E1P0C645 316 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 MMP16P51512 607 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CLDN15P56746 228 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 MFSD13AQ14CX5 517 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ATPAF1Q5TC12 328 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ZBTB37Q5TC79 503 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 FAM166AQ6J272 317 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 OR5AS1Q8N127 324 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ZIC4Q8N9L1 334 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 GPX8Q8TED1 209 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CXorf58Q96LI9 332 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 SLC6A15Q9H2J7 730 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 PNRC2Q9NPJ4 139 aaKnown RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 COPZ2Q9P299 210 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 APC2O95996 2303 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 C9orf172C9J069 976 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 DKK1O94907 266 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CD1AP06126 327 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 TDGF1P13385 188 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ACKR3P25106 362 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ZP4Q12836 540 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 PPP1R1AQ13522 171 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 RNASE10Q5GAN6 216 aaKnown RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 SLC25A47Q6Q0C1 308 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 WDR5BQ86VZ2 330 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 OR13C8Q8NGS7 320 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 OR10D3Q8NH80 312 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 GON7Q9BXV9 100 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 C12orf49Q9H741 205 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ACKR4Q9NPB9 350 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 SCP2D1Q9UJQ7 156 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 IGHMP01871 453 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 CD63P08962 238 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 UBCP0CG48 685 aaKnown RBP10.47□□□□□ -0.73
PTPRN-204ENST00000423636 TMEM225BP0DP42 221 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 DUSP1P28562 367 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 SLC35A1P78382 337 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 HOXA4Q00056 320 aaPredicted RBP10.47□□□□□ -0.73
PTPRN-204ENST00000423636 OPCMLQ14982 345 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 TAF9Q16594 264 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF626Q68DY1 528 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 STEAP2Q8NFT2 490 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 OR2AK2Q8NG84 335 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 ZC3H10Q96K80 434 aaKnown RBP10.47□□□□□ -0.73
PTPRN-204ENST00000423636 DMRTA2Q96SC8 542 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 RDH8Q9NYR8 311 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 LPLP06858 475 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 CSF1P09603 554 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 OR3A3P47888 321 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 TMEM50BP56557 158 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 GNG2P59768 71 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 ENDOGQ14249 297 aaKnown RBP10.47□□□□□ -0.73
PTPRN-204ENST00000423636 CEACAM16Q2WEN9 425 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 SLC36A1Q7Z2H8 476 aa10.47□□□□□ -0.73
PTPRN-204ENST00000423636 NPDC1Q9NQX5 325 aaPredicted RBP10.47□□□□□ -0.73
PTPRN-204ENST00000423636 A0A1B0GUH1 482 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 METTL21EPA6NDL7 271 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 DHHO43323 396 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 SSX5O60225 188 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 AQP8O94778 261 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 ALX3O95076 343 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 IFNA6P05013 189 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 ERCC1P07992 297 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-204ENST00000423636 BLVRBP30043 206 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-204ENST00000423636 FAUP35544 74 aaKnown RBP10.46□□□□□ -0.73
PTPRN-204ENST00000423636 MAGEA5P43359 124 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 MLF1P58340 268 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 MC2RQ01718 297 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 DHRS2Q13268 280 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 BAIAP2L2Q6UXY1 529 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 FADS6Q8N9I5 356 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 OR6X1Q8NH79 312 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 MRGPRFQ96AM1 343 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 GPN1Q9HCN4 374 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF224Q9NZL3 707 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 IGKV1D-8A0A087WSZ0 117 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 M0R135 149 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 ADAP1O75689 374 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF32P17041 273 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 CAPZA1P52907 286 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 PMP22Q01453 160 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 SPEM2Q0P670 501 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 KISS1Q15726 138 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 FDX2Q6P4F2 183 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 C6orf15Q6UXA7 325 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-204ENST00000423636 SEZ6L2Q6UXD5 910 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 UNQ6126/PRO20091Q6UXV3 157 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 SLC22A24Q8N4F4 322 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 FNDC9Q8TBE3 224 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF799Q96GE5 643 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 TMEM59Q9BXS4 323 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 DEFB127Q9H1M4 99 aa10.46□□□□□ -0.73
PTPRN-204ENST00000423636 PCSK5Q92824 1860 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms