RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SPATA46Q5T0L3 261 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 THEM4Q5T1C6 240 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 C1orf140Q5VVS0 124 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 FAM219BQ5XKK7 198 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ZFAND6Q6FIF0 208 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF774Q6NX45 483 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ADAMTSL5Q6ZMM2 481 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 MSANTD1Q6ZTZ1 278 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 DPPA2Q7Z7J5 298 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 COMTD1Q86VU5 262 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF584Q8IVC4 421 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 CADM2Q8N3J6 435 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF283Q8N7M2 679 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 PAPD5Q8NDF8 572 aaKnown RBP3.94□□□□□ -1.78
SFXN1-202ENST00000421887 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 OR2Z1Q8NG97 314 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 OR5AK3PQ8NH89 298 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 PNPT1Q8TCS8 783 aaKnown RBP3.94□□□□□ -1.78
SFXN1-202ENST00000421887 NPRL2Q8WTW4 380 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 MTERF3Q96E29 417 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 LRR1Q96L50 414 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 TECTBQ96PL2 329 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 TSSK3Q96PN8 268 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 OR2M2Q96R28 347 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 CCT7Q99832 543 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 MRPL57Q9BQC6 102 aaKnown RBP3.94□□□□□ -1.78
SFXN1-202ENST00000421887 DCTN5Q9BTE1 182 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 FUT8Q9BYC5 575 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 NPFFR1Q9GZQ6 430 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 KCNN2Q9H2S1 579 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ATAD3AQ9NVI7 634 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 DCAF16Q9NXF7 216 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 SLC17A7Q9P2U7 560 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 ATP6V1HQ9UI12 483 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 JRKLQ9Y4A0 524 aa3.94□□□□□ -1.78
SFXN1-202ENST00000421887 CMYA5Q8N3K9 4069 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 TRBV5-7A0A0A0MS05 114 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 GAGE12JA6NER3 117 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 A8MT66 165 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 TMEM178BH3BS89 294 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SLC28A1O00337 649 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 AIM2O14862 343 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 TBX19O60806 448 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 RGS11O94810 467 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 MFN2O95140 757 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 CD28P10747 220 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 IRF2P14316 349 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 NCF2P19878 526 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 RPL3P39023 403 aaKnown RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 RPS5P46782 204 aaKnown RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 P2RY4P51582 365 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ARHGDIAP52565 204 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 CALCOCO2Q13137 446 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 MAPK14Q16539 360 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 PNLIPRP3Q17RR3 467 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 C2orf76Q3KRA6 126 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 GPAT3Q53EU6 434 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 XKR7Q5GH72 579 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 WDR25Q64LD2 544 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SLC16A14Q7RTX9 510 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 CENPVQ7Z7K6 275 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SKA3Q8IX90 412 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 KLHL7Q8IXQ5 586 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 C20orf196Q8IYI0 205 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF440Q8IYI8 595 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ZDHHC23Q8IYP9 409 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SLC22A24Q8N4F4 322 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 NATD1Q8N6N6 113 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF485Q8NCK3 441 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 RBM15BQ8NDT2 890 aaKnown RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 MFSD8Q8NHS3 518 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 CLHC1Q8NHS4 586 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 C8orf46Q8TAG6 207 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SLC25A40Q8TBP6 338 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SFXN5Q8TD22 340 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 KLF14Q8TD94 323 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 TMED6Q8WW62 240 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 PTP4A1Q93096 173 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 METTL2AQ96IZ6 378 aaKnown RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 KCNA7Q96RP8 456 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 NKX3-1Q99801 234 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ASCL2Q99929 193 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 OR2J1Q9GZK6 312 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF350Q9GZX5 532 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 RANBP3Q9H6Z4 567 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-202ENST00000421887 MID1IP1Q9NPA3 183 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 SPAG4Q9NPE6 437 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 POLE3Q9NRF9 147 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 C1orf109Q9NX04 203 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF224Q9NZL3 707 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ZNRD1Q9P1U0 126 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 ERVK-18Q9QC07 812 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 IL19Q9UHD0 177 aa3.93□□□□□ -1.78
SFXN1-202ENST00000421887 A0A1B0GVI7 797 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 A4D1N5 150 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 C5orf49A4QMS7 147 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms