RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 KLHDC2Q9Y2U9 406 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 IGHV3OR16-10A0A075B7F0 116 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 H3BN98 237 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 LGALS8O00214 317 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 DYNC1I1O14576 645 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 SELENOFO60613 162 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 OSMP13725 252 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 IRF2P14316 349 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 SLC2A5P22732 501 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 PRTN3P24158 256 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 ZNF121P58317 390 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 TAF13Q15543 124 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 AWAT1Q58HT5 328 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 SFRP4Q6FHJ7 346 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 PLBD1Q6P4A8 553 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 LRRN1Q6UXK5 716 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 RHOUQ7L0Q8 258 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 NLRC3Q7RTR2 1065 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 FAM90A1Q86YD7 464 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 BBS1Q8NFJ9 593 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 OTOSQ8NHW6 89 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 GCDHQ92947 438 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 ZMYND19Q96E35 227 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 REEP6Q96HR9 211 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 PLEKHA8Q96JA3 519 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 DUX5Q96PT3 197 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 NUDT16L1Q9BRJ7 211 aaKnown RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 FGF23Q9GZV9 251 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 OR51V1Q9H2C8 321 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 C1orf123Q9NWV4 160 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 CLN8Q9UBY8 286 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 NOP16Q9Y3C1 178 aaKnown RBP9.17□□□□□ -0.94
SSBP3-206ENST00000420121 N6AMT1Q9Y5N5 214 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
SSBP3-206ENST00000420121 TRRAPQ9Y4A5 3859 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 MDFIC2A0A1B0GVS7 189 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 OOEPA6NGQ2 149 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 PRODHO43272 600 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 TBX1O43435 398 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 FKBP6O75344 327 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 ANXA2P07355 339 aaKnown RBP9.16□□□□□ -0.94
SSBP3-206ENST00000420121 GRPP07492 148 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 HKR1P10072 659 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 MMP9P14780 707 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 ACKR3P25106 362 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 POU1F1P28069 291 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 DDOSTP39656 456 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 SLC15A1P46059 708 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 GSK3AP49840 483 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 FGF12P61328 243 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 ELF3P78545 371 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-206ENST00000420121 OR8B8Q15620 311 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 TEX36Q5VZQ5 186 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 TMEM236Q5W0B7 351 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 BTNL3Q6UXE8 466 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 FAM57BQ71RH2 274 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 SHFQ7M4L6 423 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 CPOQ8IVL8 374 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 SPERTQ8NA61 448 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 PRDM13Q9H4Q3 707 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 SLC25A19Q9HC21 320 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 DNAJC27Q9NZQ0 273 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 POMPQ9Y244 141 aa9.16□□□□□ -0.94
SSBP3-206ENST00000420121 A0A1B0GW55 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 PRR32B1ATL7 298 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 PRR23D1E9PI22 279 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 CLDN34H7C241 214 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 LYNP07948 512 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 RNASE1P07998 156 aaKnown RBP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L2P0CJ85 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L3P0CJ86 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L4P0CJ87 422 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L5P0CJ88 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L6P0CJ89 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L7P0CJ90 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 PRR23D2P0DMB1 279 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 AMY2BP19961 511 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 ALOX5APP20292 161 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 HSD11B1P28845 292 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 NPY4RP50391 375 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 CSNK2BP67870 215 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 CBX1P83916 185 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 FLOT2Q14254 428 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 SLC9A3R2Q15599 337 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 TIGD6Q17RP2 521 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DNAL1Q4LDG9 190 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 OXLD1Q5BKU9 147 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4L9Q6RFH8 374 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 WDR82Q6UXN9 313 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 SPATA24Q86W54 205 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 FGFRL1Q8N441 504 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 BOLLQ8N9W6 283 aaKnown RBP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 OR1M1Q8NGA1 313 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 OR52H1Q8NGJ2 320 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 TAF15Q92804 592 aaKnown RBP eCLIP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 UTP4Q969X6 686 aaKnown RBP9.15□□□□□ -0.94
SSBP3-206ENST00000420121 OTULINQ96BN8 352 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms