RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NKX2-8O15522 239 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 TGM6O95932 706 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 CD74P04233 296 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 YES1P07947 543 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 AKAIN1P0CW23 69 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 MPZP25189 248 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 HTR5AP47898 357 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SLC6A9P48067 706 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SRSF6Q13247 344 aaKnown RBP7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 CLN3Q13286 438 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 KCNJ8Q15842 424 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 PCGF3Q3KNV8 242 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SNAI3Q3KNW1 292 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 LINC00303Q3SY05 128 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 MOGAT2Q3SYC2 334 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 ZFP69Q49AA0 526 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SFRP5Q5T4F7 317 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 ZBTB37Q5TC79 503 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 AWAT2Q6E213 333 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 OR10K2Q6IF99 312 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SEZ6L2Q6UXD5 910 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 COLCA1Q6ZS62 124 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SLC16A14Q7RTX9 510 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 NAA40Q86UY6 237 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 COMMD2Q86X83 199 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SKA3Q8IX90 412 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 KCNG3Q8TAE7 436 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 FGFBP3Q8TAT2 258 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 FNDC9Q8TBE3 224 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SPSB4Q96A44 273 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SPSB1Q96BD6 273 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SGK3Q96BR1 496 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 MED30Q96HR3 178 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 NKX3-1Q99801 234 aaPredicted RBP7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 LRFN3Q9BTN0 628 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 C1QTNF5Q9BXJ0 243 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 PRDM14Q9GZV8 571 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 LPAR5Q9H1C0 372 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 OR51J1Q9H342 316 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 RANGRFQ9HD47 186 aaPredicted RBP7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 FAM86C1Q9NVL1 165 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 MCUBQ9NWR8 336 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 SPRR3Q9UBC9 169 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 CLCF1Q9UBD9 225 aa7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 MRPS28Q9Y2Q9 187 aaKnown RBP7.9□□□□□ -1.14
LINCMD1-201ENST00000418518 GTF3C1Q12789 2109 aa7.9□□□□□ -1.15
LINCMD1-201ENST00000418518 TRAV17A0A0B4J275 112 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 hCG_38984A0A1B0GV85 526 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 A6NL46 340 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 FOXI3A8MTJ6 420 aaPredicted RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 XRCC2O43543 280 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 ICMTO60725 284 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 SS18L1O75177 396 aaPredicted RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 C1QBP02746 253 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 CHRM2P08172 466 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 GSTP1P09211 210 aaKnown RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 FCGR2AP12318 317 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 ACKR3P25106 362 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 STOMP27105 288 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 RCVRNP35243 200 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 TAS2R19P59542 299 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 ARF1P84077 181 aaKnown RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 SRYQ05066 204 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 MAB21L1Q13394 359 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 TNK1Q13470 666 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 RBMS2Q15434 407 aaKnown RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 OR8B8Q15620 311 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 RNF144BQ7Z419 303 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 DPPA2Q7Z7J5 298 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 ANGPTL5Q86XS5 388 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 TUSC5Q8IXB3 177 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 GABRG1Q8N1C3 465 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 FAM89BQ8N5H3 189 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 FDCSPQ8NFU4 85 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 OR10R2Q8NGX6 335 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 AKR7LQ8NHP1 331 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 GIMAP1Q8WWP7 306 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 APH1AQ96BI3 265 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 REEP6Q96HR9 211 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 FYTTD1Q96QD9 318 aaKnown RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 TM2D1Q9BX74 207 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 NPDC1Q9NQX5 325 aaPredicted RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 B3GNT2Q9NY97 397 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 DLL3Q9NYJ7 618 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 MRPL15Q9P015 296 aaKnown RBP7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 POU2F3Q9UKI9 436 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 PIGLQ9Y2B2 252 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 NPTNQ9Y639 398 aa7.89□□□□□ -1.15
LINCMD1-201ENST00000418518 A0A0A6YYD4 124 aa7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 A8MV72 311 aaPredicted RBP7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 SNRPGP15A8MWD9 76 aa7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 RGS13O14921 159 aa7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 CDC14BO60729 498 aa7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 CA11O75493 328 aa7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 HCKP08631 526 aa7.88□□□□□ -1.15
LINCMD1-201ENST00000418518 SULT1A3P0DMM9 295 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms