RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 SEC61A1P61619 476 aaKnown RBP12.84□□□□□ -0.35
NUP50-204ENST00000417702 FAM3AP98173 230 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
NUP50-204ENST00000417702 MPPED2Q15777 294 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 SNCBQ16143 134 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 ZNF404Q494X3 552 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 PRSS45Q7RTY3 260 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 OR8S1Q8NH09 359 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 DVL3Q92997 716 aaPredicted RBP12.84□□□□□ -0.35
NUP50-204ENST00000417702 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
NUP50-204ENST00000417702 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 TMEM246Q9BRR3 403 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
NUP50-204ENST00000417702 GABARAPL1Q9H0R8 117 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 NIPAL2Q9H841 368 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 MMP26Q9NRE1 261 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 RNF7Q9UBF6 113 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 ENOPH1Q9UHY7 261 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 LAMP5Q9UJQ1 280 aa12.84□□□□□ -0.35
NUP50-204ENST00000417702 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 A6NLC8 198 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 H3BNX3 289 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 PTBP3O95758 552 aaKnown RBP12.83□□□□□ -0.36
NUP50-204ENST00000417702 GRPP07492 148 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 ALOX5APP20292 161 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 GNB2P62879 340 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 ZNF154Q13106 437 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 KCNJ8Q15842 424 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 KRT77Q7Z794 578 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 FTMTQ8N4E7 242 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 BOLLQ8N9W6 283 aaKnown RBP12.83□□□□□ -0.36
NUP50-204ENST00000417702 DEFB108BQ8NET1 73 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 CSNK2A3Q8NEV1 391 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 TEAD3Q99594 435 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 PKP2Q99959 881 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 OSBPL10Q9BXB5 764 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 S100A14Q9HCY8 104 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 H2AFY2Q9P0M6 372 aaPredicted RBP12.83□□□□□ -0.36
NUP50-204ENST00000417702 OPN4Q9UHM6 478 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 OAZ3Q9UMX2 235 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 DOCK11Q5JSL3 2073 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 DNHD1Q96M86 4753 aa12.83□□□□□ -0.36
NUP50-204ENST00000417702 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 TRAPPC2LH3BP13 241 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 PRKYO43930 277 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 MITFO75030 526 aaPredicted RBP12.82□□□□□ -0.36
NUP50-204ENST00000417702 ZNF12P17014 697 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 GNALP38405 381 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 GSK3AP49840 483 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 PSMA6P60900 246 aaKnown RBP12.82□□□□□ -0.36
NUP50-204ENST00000417702 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
NUP50-204ENST00000417702 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 LRRN1Q6UXK5 716 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 DCDC5Q6ZRR9 648 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 STMN2Q93045 179 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 PAPOLGQ9BWT3 736 aaKnown RBP12.82□□□□□ -0.36
NUP50-204ENST00000417702 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 ZNF319Q9P2F9 582 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 KLHDC2Q9Y2U9 406 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 TMEM14AQ9Y6G1 99 aa12.82□□□□□ -0.36
NUP50-204ENST00000417702 hCG_1807616A0A1W2PRN6 198 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 SAC3D1A6NKF1 404 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 LGALS8O00214 317 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 MRPL3P09001 348 aaKnown RBP12.81□□□□□ -0.36
NUP50-204ENST00000417702 FPR2P25090 351 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 PITPNBP48739 271 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 OR8B8Q15620 311 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 ARMCX4Q5H9R4 360 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 SLX4IPQ5VYV7 408 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 KDM4DQ6B0I6 523 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 DEGS2Q6QHC5 323 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 BPIFB2Q8N4F0 458 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 TCEANCQ8N8B7 351 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 C19orf18Q8NEA5 215 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 RBM4BQ9BQ04 359 aaKnown RBP12.81□□□□□ -0.36
NUP50-204ENST00000417702 SUCNR1Q9BXA5 334 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 MROQ9BYG7 248 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 CLN8Q9UBY8 286 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 ZNF391Q9UJN7 358 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 LRP12Q9Y561 859 aa12.81□□□□□ -0.36
NUP50-204ENST00000417702 TRAV38-1A0A0B4J264 116 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 CCDC182A6NF36 153 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 ANXA2P2A6NMY6 339 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 ZAR1LA6NP61 321 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 RGS9O75916 674 aaPredicted RBP12.8□□□□□ -0.36
NUP50-204ENST00000417702 VENTXO95231 258 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 HCCSP53701 268 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 IL5RAQ01344 420 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 SFRP4Q6FHJ7 346 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms