RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	RPL36	Q9Y3U8	105 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-231	ENST00000417521	PCDHGB5	Q9Y5G0	923 aa		13.82	□□□□□ -0.2
DDR1-231	ENST00000417521	FBN1	P35555	2871 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-231	ENST00000417521		A0A1W2PQL4	384 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-231	ENST00000417521		J3QRE1	110 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	MAGEB4	O15481	346 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	OPRL1	P41146	370 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	SLC15A1	P46059	708 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	SLC6A9	P48067	706 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	SRP9	P49458	86 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	CXCR4	P61073	352 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	TAF13	Q15543	124 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	MALRD1	Q5VYJ5	2156 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	LRRN1	Q6UXK5	716 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	BHLHE23	Q8NDY6	225 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	MEGF10	Q96KG7	1140 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	KCNJ15	Q99712	375 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	DCAF16	Q9NXF7	216 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	EXOG	Q9Y2C4	368 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	MYRF	Q9Y2G1	1151 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	TMEM14A	Q9Y6G1	99 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	CUBN	O60494	3623 aa		13.81	□□□□□ -0.2
DDR1-231	ENST00000417521	ISPD	A4D126	451 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	ZNF670-ZNF695	F2Z2N8	137 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	MLNR	O43193	412 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	PLPP2	O43688	288 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	XPNPEP2	O43895	674 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	IGHV2-70	P01814	119 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	H2BFM	P0C1H6	154 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	OR2T7	P0C7T2	308 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	PRKX	P51817	358 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	RHOU	Q7L0Q8	258 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	MRPL21	Q7Z2W9	205 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	KRT77	Q7Z794	578 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	OR10AD1	Q8NGE0	317 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	OR52I1	Q8NGK6	324 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	OR2T27	Q8NH04	317 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	MNT	Q99583	582 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	GCM1	Q9NP62	436 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	MRPS18A	Q9NVS2	196 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521		H0YL77	283 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	TMEM178B	H3BS89	294 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	ANOS1	P23352	680 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	SRP14	P37108	136 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	GRB2	P62993	217 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	ZNF85	Q03923	595 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	RAB40B	Q12829	278 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	SNAI3	Q3KNW1	292 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	TMEM155	Q4W5P6	130 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	LRRC28	Q86X40	367 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	CELF2-AS1	Q8N7Q2	184 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	BPIFB6	Q8NFQ5	453 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	ASB17	Q8WXJ9	295 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	OR8B4	Q96RC9	309 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	SIGLEC11	Q96RL6	698 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	SLC22A4	Q9H015	551 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	G6PC2	Q9NQR9	355 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	IKZF2	Q9UKS7	526 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	LRP12	Q9Y561	859 aa		13.8	□□□□□ -0.2
DDR1-231	ENST00000417521	CD300LB	A8K4G0	201 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	FAM20B	O75063	409 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	FADS2	O95864	444 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	APOC1	P02654	83 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	SLC2A1	P11166	492 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	HSD11B1	P28845	292 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	GATA4	P43694	442 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	ROM1	Q03395	351 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	ZNF92	Q03936	586 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	ZNF181	Q2M3W8	571 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	C6orf141	Q5SZD1	244 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	KCTD18	Q6PI47	426 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	KLHL36	Q8N4N3	616 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	SPIC	Q8N5J4	248 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	TMEM158	Q8WZ71	300 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	GGH	Q92820	318 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	FAHD2A	Q96GK7	314 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	OPA3	Q9H6K4	179 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	SP140L	Q9H930	580 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	UBAP1	Q9NZ09	502 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	NOP16	Q9Y3C1	178 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	N6AMT1	Q9Y5N5	214 aa		13.79	□□□□□ -0.2
DDR1-231	ENST00000417521	MXRA5	Q9NR99	2828 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	DAPL1	A0PJW8	107 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	C5orf63	A6NC05	138 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521		F5H5P2	479 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PHYH	O14832	338 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PHF1	O43189	567 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PNP	P00491	289 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	HLA-DPB1	P04440	258 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	GATA3	P23771	443 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	CX3CR1	P49238	355 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	MMP16	P51512	607 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PRSS12	P56730	875 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	BTG1	P62324	171 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	ACTC1	P68032	377 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	ACTA1	P68133	377 aa		13.78	□□□□□ -0.2

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