RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 DDX28Q9NUL7 540 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-203ENST00000415281 CTSZQ9UBR2 303 aa10.35□□□□□ -0.75
NCKIPSD-203ENST00000415281 ENOPH1Q9UHY7 261 aa10.35□□□□□ -0.75
NCKIPSD-203ENST00000415281 LRCH1Q9Y2L9 728 aa10.35□□□□□ -0.75
NCKIPSD-203ENST00000415281 ORC6Q9Y5N6 252 aa10.35□□□□□ -0.75
NCKIPSD-203ENST00000415281 ZAR1LA6NP61 321 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 C22orf46C9J442 243 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 CLDN34H7C241 214 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 PRKYO43930 277 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 GLCEO94923 617 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 ALPLP05186 524 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 GSTT1P30711 240 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 OTX1P32242 354 aaPredicted RBP10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 CD200P41217 278 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 ENTPD1P49961 510 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 RPS7P62081 194 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 BAMBIQ13145 260 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 APOFQ13790 326 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 SNAI3Q3KNW1 292 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 ESCO2Q56NI9 601 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 ARMCX4Q5H9R4 360 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 PRAMEF6Q5VXH4 476 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 SLX4IPQ5VYV7 408 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 DCXRQ7Z4W1 244 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 BCDIN3DQ7Z5W3 292 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 ERI1Q8IV48 349 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 TCEANCQ8N8B7 351 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 Q8TCH9 128 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 IL4I1Q96RQ9 567 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 ZNF696Q9H7X3 374 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 TMEM100Q9NV29 134 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 COMMD3-BMI1R4GMX3 469 aa10.34□□□□□ -0.75
NCKIPSD-203ENST00000415281 TGP01266 2768 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 F5H5K5 113 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 IFNL4K9M1U5 179 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 FAM20BO75063 409 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 RPS2P15880 293 aaKnown RBP10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 SRP9P49458 86 aaKnown RBP10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 ALDH3A2P51648 485 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 BLVRAP53004 296 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 ZNF92Q03936 586 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 FOXL1Q12952 345 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 WDR25Q64LD2 544 aaPredicted RBP10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 SPATC1Q76KD6 591 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 DPY19L4Q7Z388 723 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 MUC20Q8N307 709 aaPredicted RBP10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 OR5L1Q8NGL2 311 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 OR6N2Q8NGY6 317 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 EME1Q96AY2 570 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 NEIL1Q96FI4 390 aaPredicted RBP10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 INTS14Q96SY0 518 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 ATF6BQ99941 703 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 C9orf16Q9BUW7 83 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 MRI1Q9BV20 369 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 PRRG3Q9BZD7 231 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 CENPMQ9NSP4 180 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 H2AFY2Q9P0M6 372 aaPredicted RBP10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 MIOXQ9UGB7 285 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 KCNG2Q9UJ96 466 aa10.33□□□□□ -0.76
NCKIPSD-203ENST00000415281 PRODHO43272 600 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 SELENOFO60613 162 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 MMP9P14780 707 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 CPT2P23786 658 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 HCCSP53701 268 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 GNB2P62879 340 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 ELF3P78545 371 aaPredicted RBP10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 RELBQ01201 579 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 SRSF4Q08170 494 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 EIF2B1Q14232 305 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 RCN1Q15293 331 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 TAF13Q15543 124 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 LRRC36Q1X8D7 754 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 DEFB112Q30KQ8 113 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 C12orf73Q69YU5 71 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 LRRN1Q6UXK5 716 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 BRD3OSQ6XYD6 125 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 CELF2-AS1Q8N7Q2 184 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 OR2AE1Q8NHA4 323 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 TMEM163Q8TC26 289 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 THEM6Q8WUY1 208 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 UBE2FQ969M7 185 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 TEAD3Q99594 435 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 GABARAPL3Q9BY60 117 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 RASSF4Q9H2L5 321 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 PPP1R3EQ9H7J1 279 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 UNKLQ9H9P5 680 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 USE1Q9NZ43 259 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 OR5V1Q9UGF6 321 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 N6AMT1Q9Y5N5 214 aa10.32□□□□□ -0.76
NCKIPSD-203ENST00000415281 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 HOXA3O43365 443 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 LCATP04180 440 aa10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 MRPL3P09001 348 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 MDKP21741 143 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 SLC2A5P22732 501 aa10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 CA6P23280 308 aa10.31□□□□□ -0.76
NCKIPSD-203ENST00000415281 NAA10P41227 235 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms