RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GCKP35557 465 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 CSNK1A1P48729 337 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 CSNK1DP48730 415 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SERPINB8P50452 374 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PAFAH1B2P68402 229 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 RAB40BQ12829 278 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TAB1Q15750 504 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TTMPQ5BVD1 217 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PAGE3Q5JUK9 113 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 C4orf22Q6V702 233 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ARHGAP18Q8N392 663 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 DHRSXQ8N5I4 330 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ST6GALNAC3Q8NDV1 305 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 OR56B4Q8NH76 319 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 LRRC29Q8WV35 223 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TFB1MQ8WVM0 346 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 NTAN1Q96AB6 310 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZNF524Q96C55 264 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 RPUSD4Q96CM3 377 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZBED6CLQ96FA7 236 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 TRNT1Q96Q11 434 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 WDR13Q9H1Z4 485 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 CDC42EP4Q9H3Q1 356 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 CAB39LQ9H9S4 337 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TMBIM4Q9HC24 238 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SDF2L1Q9HCN8 221 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ADAP2Q9NPF8 381 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ABCC13Q9NSE7 274 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PAK5Q9P286 719 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PHF3Q92576 2039 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 C2CD3Q4AC94 2353 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 A0A087WW49 117 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TMEM213A2RRL7 107 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 IDSB3KWA1 339 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 E9PLD3 99 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 GOLGA8RI6L899 631 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TRIM3O75382 744 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 TNFAIP8O95379 198 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 NUDT14O95848 222 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SHBGP04278 402 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SERPINA5P05154 406 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 PVRP15151 417 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 CSNK2A2P19784 350 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 IFNA8P32881 189 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 KIR2DS4P43632 304 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SLCO1A2P46721 670 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 KPNA2P52292 529 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 TMEM33P57088 247 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 LAGE3Q14657 143 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TRAM2Q15035 370 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SNAI3Q3KNW1 292 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SAPCD1Q5SSQ6 148 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SDHAF4Q5VUM1 108 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 NCBP2-AS2Q69YL0 99 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 C22orf42Q6IC83 251 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TAC4Q86UU9 113 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 ST13P4Q8IZP2 240 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 PDIK1LQ8N165 341 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 OR6F1Q8NGZ6 308 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 PIFOQ8TCI5 191 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 C9orf72Q96LT7 481 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 MMP28Q9H239 520 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 B4GALT7Q9UBV7 327 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 SDK1Q7Z5N4 2213 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 HECTD1Q9ULT8 2610 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 CXorf51AA0A1B0GTR3 108 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 MGAT4DA6NG13 374 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 MFSD11O43934 449 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 APOEP02649 317 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 PHBP35232 272 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 VHLP40337 213 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 HCAR3P49019 387 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 PRLHRP49683 370 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 MAGOHP61326 146 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 SELENOTP62341 195 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 MRPS15P82914 257 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 SARNPP82979 210 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 CYLC2Q14093 348 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 HAGHQ16775 308 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 ZNF630Q2M218 657 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 NSUN5P1Q3KNT7 163 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 BRMS1LQ5PSV4 323 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 RWDD4Q6NW29 188 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 LRRC74BQ6ZQY2 392 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 NCCRP1Q6ZVX7 275 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 BHLHA9Q7RTU4 235 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 RBM45Q8IUH3 476 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 OR5AP2Q8NGF4 316 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 OR1S2Q8NGQ3 325 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 PYROXD1Q8WU10 500 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TFGQ92734 400 aaPredicted RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 C11orf52Q96A22 123 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TMA16Q96EY4 203 aaKnown RBP2.06□□□□□ -2.08
MCF2-204ENST00000414978 SERPINB11Q96P15 392 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 QKIQ96PU8 341 aaKnown RBP eCLIP2.06□□□□□ -2.08
MCF2-204ENST00000414978 SELENOSQ9BQE4 189 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 OR12D3Q9UGF7 316 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 STOML2Q9UJZ1 356 aa2.06□□□□□ -2.08
MCF2-204ENST00000414978 TMCO1Q9UM00 188 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms