RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HMGA2P52926 109 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 NUDT6P53370 316 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SNRPD2P62316 118 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 FOXI1Q12951 378 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 HNRNPA0Q13151 305 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 CARTPTQ16568 116 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CLEC12BQ2HXU8 276 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 TBC1D28Q2M2D7 210 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SERTAD4-AS1Q5TG53 156 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 FAM27BQ5VT28 67 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 TMEM236Q5W0B7 351 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ZNF544Q6NX49 715 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CORO6Q6QEF8 472 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SPNS3Q6ZMD2 512 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 RASSF6Q6ZTQ3 369 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 FOXL2NBQ6ZUU3 175 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 AMIGO2Q86SJ2 522 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ADCK1Q86TW2 530 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CCDC36Q8IYA8 594 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ZNF101Q8IZC7 436 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 OR6V1Q8N148 313 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 LRRC75A-AS1Q8N1F1 130 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 LINC00471Q8N535 108 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ZNF525Q8N782 197 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 NKAIN3Q8N8D7 197 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SLC37A3Q8NCC5 494 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 OR4F15Q8NGB8 312 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 OR52N4Q8NGI2 321 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 PYDC1Q8WXC3 89 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 GTF3AQ92664 365 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 SORCS2Q96PQ0 1159 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 FEVQ99581 238 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 MRPL37Q9BZE1 423 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 OR2H1Q9GZK4 316 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 WNT5BQ9H1J7 359 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SEMA6AQ9H2E6 1030 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 PLK3Q9H4B4 646 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 NTN4Q9HB63 628 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ZNF701Q9NV72 531 aaPredicted RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 DNAJB9Q9UBS3 223 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 B9D1Q9UPM9 204 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 POLR1DQ9Y2S0 133 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SETD2Q9BYW2 2564 aaPredicted RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 IGHV4-30-2A0A087WSY4 118 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 IGLV1-36A0A0B4J1U3 117 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 A0A1W2PPW3 197 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 C12orf71A8MTZ7 269 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 LYNX1G3V0Z9 82 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 M0R129 80 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 EBAG9O00559 213 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 RRHO14718 337 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 ARPC3O15145 178 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 RER1O15258 196 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 SGCEO43556 437 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 MITFO75030 526 aaPredicted RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 NGFP01138 241 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 TFP02787 698 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 HNRNPCP07910 306 aaKnown RBP eCLIP4.16□□□□□ -1.74
VPS41-205ENST00000414632 ADRA2AP08913 450 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 LYNX1P0DP58 116 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 ZNF20P17024 532 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 GSTM3P21266 225 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 GLRXP35754 106 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 RBMXP38159 391 aaKnown RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 MPV17P39210 176 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 HTR5AP47898 357 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 GDI2P50395 445 aaKnown RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 TNK1Q13470 666 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 CRMP1Q14194 572 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 GINS1Q14691 196 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 RAB35Q15286 201 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 CCDC92Q53HC0 331 aaPredicted RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 TMEM255AQ5JRV8 349 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 SHEQ5VZ18 495 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 ACSM5Q6NUN0 579 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 DNM1P34Q6PK57 102 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 Q6YL49 198 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 CFAP77Q6ZQR2 320 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 RFPL4BQ6ZWI9 263 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 ASRGL1Q7L266 308 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 PAPD5Q8NDF8 572 aaKnown RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 NPEPL1Q8NDH3 523 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 NUP37Q8NFH4 326 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 OR1J1Q8NGS3 322 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 OR6K6Q8NGW6 343 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 TEX47Q8TBZ9 253 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 FNDC8Q8TC99 324 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 NEU4Q8WWR8 484 aaPredicted RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 MRPL24Q96A35 216 aaKnown RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 POM121L2Q96KW2 1035 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 HCAR1Q9BXC0 346 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 DGCR6LQ9BY27 220 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 OR2J1Q9GZK6 312 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 YY1AP1Q9H869 796 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 DYNLRB1Q9NP97 96 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 MRPL22Q9NWU5 206 aaKnown RBP4.16□□□□□ -1.74
VPS41-205ENST00000414632 PLEK2Q9NYT0 353 aa4.16□□□□□ -1.74
VPS41-205ENST00000414632 IL20Q9NYY1 176 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms