RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MYOZ1Q9NP98 299 aaPredicted RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 NXT1Q9UKK6 140 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 RLFQ13129 1914 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 C5orf52A6NGY3 159 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 H3BML4 177 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 UBE2V2Q15819 145 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 OR51E1Q8TCB6 317 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 DDIT4LQ96D03 193 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 RRNAD1Q96FB5 475 aaKnown RBP12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 TSPAN32Q96QS1 320 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 CHD5Q8TDI0 1954 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 G3V3Q6 166 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 TERTO14746 1132 aaKnown RBP12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 SLC31A2O15432 143 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 EFSO43281 561 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 TMEM215Q68D42 235 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 WDR13Q9H1Z4 485 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 NKX2-4Q9H2Z4 354 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 KLF2Q9Y5W3 355 aaPredicted RBP12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 PATJQ8NI35 1801 aa12.46□□□□□ -0.41
CLTCL1-201ENST00000412649 CDC14CA4D256 554 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 ACRP10323 421 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC2A1P11166 492 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 NR0B2Q15466 257 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 MRGPRX3Q96LB0 322 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF286AQ9HBT8 521 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 NECAP2Q9NVZ3 263 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 CCDC187A0A096LP49 1063 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 CLDN34H7C241 214 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 UPK3AO75631 287 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 REC114Q7Z4M0 266 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 ZAR1Q86SH2 424 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 KTI12Q96EK9 354 aaPredicted RBP12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 MOGAT1Q96PD6 335 aa12.46□□□□□ -0.42
CLTCL1-201ENST00000412649 POLR2AP24928 1970 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 H7BYZ3 331 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 FGF16O43320 207 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 C1orf140Q5VVS0 124 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 IGFLR1Q9H665 355 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 KCNE5Q9UJ90 142 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 TRBV5-7A0A0A0MS05 114 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 NSG1A0A0A6YYJ2 146 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 A8MVM7 634 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 CEBPBP17676 345 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 OR4C3Q8NH37 302 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 STT3BQ8TCJ2 826 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 FGF11Q92914 225 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 SLAMF6Q96DU3 332 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 DOK5Q9P104 306 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF727A8MUV8 499 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 HCRTR1O43613 425 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 HNRNPA1P09651 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 CD79AP11912 226 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 BLKP51451 505 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 PIGPP57054 158 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 PRICKLE4Q2TBC4 344 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 LBHQ53QV2 105 aaPredicted RBP12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 ETV3LQ6ZN32 361 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 CA13Q8N1Q1 262 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 FAM3CQ92520 227 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 KNL1Q8NG31 2342 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 ZSWIM8A7E2V4 1837 aa12.45□□□□□ -0.42
CLTCL1-201ENST00000412649 A0A1B0GTI1 187 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 BLACEA4D250 179 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 CXorf65A6NEN9 183 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 COLCA2A8K830 154 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 FOLR2P14207 255 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 KIR3DL2P43630 455 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 MLF2Q15773 248 aaPredicted RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 VN1R4Q7Z5H5 301 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 IP6K3Q96PC2 410 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 FAM117AQ9C073 453 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 CA14Q9ULX7 337 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 ICAM5Q9UMF0 924 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 SCN3AQ9NY46 2000 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 PRRT4C9JH25 899 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 GPR37O15354 613 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 HOXB2P14652 356 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF124Q15973 351 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 OR52N4Q8NGI2 321 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 C16orf52Q8NHV5 167 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 ROBO4Q8WZ75 1007 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC46A1Q96NT5 459 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 NUDT22Q9BRQ3 303 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 MEX3AA1L020 520 aaKnown RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 H3BQ15 152 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 LINC01387J3KSC0 135 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 ID4P47928 161 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 RPS18P62269 152 aaKnown RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF77Q15935 545 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 TEX30Q5JUR7 227 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms