RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 GLRA2P23416 452 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 HTR1DP28221 377 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 OTX1P32242 354 aaPredicted RBP0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 MPIP34949 423 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 OR12D2P58182 307 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 EIF3EP60228 445 aaKnown RBP0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 DDX39BQ13838 428 aaKnown RBP0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 C9orf135Q5VTT2 229 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 Q6ZSR6 202 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 FA2HQ7L5A8 372 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 PAGE2Q7Z2X7 111 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 CBLN2Q8IUK8 224 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 CMTM1Q8IZ96 169 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 EIF4E3Q8N5X7 224 aaKnown RBP0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 SLC25A29Q8N8R3 303 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 ENKURQ8TC29 256 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 ZNF606Q8WXB4 792 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 RERGQ96A58 199 aaPredicted RBP0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 ECHDC3Q96DC8 303 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 TOLLIPQ9H0E2 274 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 NEUROG2Q9H2A3 272 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 RETNQ9HD89 108 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 FBXO8Q9NRD0 319 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 USP47Q96K76 1375 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 FBN2P35556 2912 aa0.41□□□□□ -2.34
RNU2-54P-201ENST00000410299 STRCP1A6NGW2 1772 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 H3BQ85 93 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 AIM2O14862 343 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 SCAMP2O15127 329 aaKnown RBP0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 SPAG6O75602 509 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 CDS2O95674 445 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 GUCA1CO95843 209 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR5AC1P0C628 307 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 CSNK2A2P19784 350 aaPredicted RBP0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 IFNAR2P48551 515 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 IFITM3Q01628 133 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 BST1Q10588 318 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 TSC22D1Q15714 1073 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 PSMD5Q16401 504 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 FAM104BQ5XKR9 115 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 CERS6Q6ZMG9 384 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 CDH26Q8IXH8 852 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR4D6Q8NGJ1 314 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR8K3Q8NH51 312 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 DCAKDQ8WVC6 231 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR5P3Q8WZ94 311 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 CDS1Q92903 461 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 BTN2A3PQ96KV6 586 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF75AQ96N20 296 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 RACGAP1Q9H0H5 632 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR2S2Q9NQN1 319 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 INIPQ9NRY2 104 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 RGS18Q9NS28 235 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 CA10Q9NS85 328 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 PSMC3IPQ9P2W1 217 aaPredicted RBP0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 HES2Q9Y543 173 aa0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 BAZ1BQ9UIG0 1483 aaKnown RBP0.4□□□□□ -2.35
RNU2-54P-201ENST00000410299 IGKV1OR2-108A0A075B7D4 117 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 LOC102724200A0A096LPH7 203 aaPredicted RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 TRGV4A0A0C4DH28 118 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 GGTLC3B5MD39 225 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 GABRPO00591 440 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 RAD1O60671 282 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 PGA5P0DJD9 388 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 TROVE2P10155 538 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF708P17019 499 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 TNNI1P19237 187 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 PCK1P35558 622 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 GGT2P36268 569 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR1G1P47890 313 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 ACLYP53396 1101 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF121P58317 390 aaPredicted RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 PPP1CAP62136 330 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 LIPEQ05469 1076 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 CHIT1Q13231 466 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 NAB1Q13506 487 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF829Q3KNS6 432 aaPredicted RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 GCSAMLQ5JQS6 135 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 TPTE2P1Q5T6R2 138 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 IQCKQ8N0W5 287 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZFP62Q8NB50 900 aaPredicted RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 UBAC2Q8NBM4 344 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR4M2Q8NGB6 313 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 RNASE11Q8TAA1 199 aaKnown RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 S100PBPQ96BU1 408 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 PIGUQ9H490 435 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 RBFOX1Q9NWB1 397 aaKnown RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC39A1Q9NY26 324 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC2A8Q9NY64 477 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 MTCH1Q9NZJ7 389 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 CCDC59Q9P031 241 aaKnown RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 RAB22AQ9UL26 194 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 ISY1Q9ULR0 285 aaKnown RBP0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 OTOFQ9HC10 1997 aa0.39□□□□□ -2.35
RNU2-54P-201ENST00000410299 KANK1Q14678 1352 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CCL15-CCL14A0A0B4J2E2 113 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 FAM240BA0A1B0GVZ2 78 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 MYBPHLA2RUH7 354 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 ENTPD6O75354 484 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms