RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 PARP8Q8N3A8 854 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 DVL3Q92997 716 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 OR10A2Q9H208 303 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 RGCCQ9H4X1 137 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 DNAJC27Q9NZQ0 273 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 KIF17Q9P2E2 1029 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 ZNF319Q9P2F9 582 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 NUP50Q9UKX7 468 aa16.38■□□□□ 0.21
TSPAN4-209ENST00000409543 hCG_38984A0A1B0GV85 526 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 LGALS8O00214 317 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 ATP5HO75947 161 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 GRPP07492 148 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 PSMB10P40306 273 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 GSK3AP49840 483 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 DAPP51397 102 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 RPS7P62081 194 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 KCNJ8Q15842 424 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 SNAPC1Q16533 368 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 LYPD2Q6UXB3 125 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 BTNL3Q6UXE8 466 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 C19orf18Q8NEA5 215 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 BBS1Q8NFJ9 593 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 OR5K1Q8NHB7 308 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 RAB40AQ8WXH6 277 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 DACT3Q96B18 629 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 PGAM5Q96HS1 289 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 MMADHCQ9H3L0 296 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 BRD7Q9NPI1 651 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 C1orf123Q9NWV4 160 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 TVP23BQ9NYZ1 205 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 CLN8Q9UBY8 286 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 DOCK11Q5JSL3 2073 aa16.37■□□□□ 0.21
TSPAN4-209ENST00000409543 IGHV2-70DA0A0C4DH43 119 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 TRIM77I1YAP6 450 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 PPIAL4GP0DN37 164 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 ALOX5APP20292 161 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 NAA10P41227 235 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 APOFQ13790 326 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 TUSC1Q2TAM9 212 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 KLF17Q5JT82 389 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 WDR25Q64LD2 544 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 ZNF841Q6ZN19 808 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 OR8S1Q8NH09 359 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 FAM216AQ8WUB2 273 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 C22orf15Q8WYQ4 148 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 NIPAL2Q9H841 368 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 TRIM36Q9NQ86 728 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 KLHDC2Q9Y2U9 406 aa16.36■□□□□ 0.21
TSPAN4-209ENST00000409543 KIR2DS1A0A191URI9 304 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 A6NLC8 198 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 PHYHO14832 338 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 ESRRGP62508 458 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 HOXA4Q00056 320 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 PTGES3Q15185 160 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 ATP6AP1Q15904 470 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 SNCBQ16143 134 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 SFRP4Q6FHJ7 346 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 ZNF826PQ6ZT77 177 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 BOLLQ8N9W6 283 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 CSNK2A3Q8NEV1 391 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 TEAD3Q99594 435 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 YIPF3Q9GZM5 350 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 LAMP5Q9UJQ1 280 aa16.35■□□□□ 0.21
TSPAN4-209ENST00000409543 TRAV38-1A0A0B4J264 116 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 OOEPA6NGQ2 149 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 TNFRSF13BO14836 293 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 NDUFA2O43678 99 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 LHBP01229 141 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 NPY4RP50391 375 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 PSMA6P60900 246 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 OR8B8Q15620 311 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 GFOD2Q3B7J2 385 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 FTMTQ8N4E7 242 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 GCSAMQ8N6F7 178 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 UPRTQ96BW1 309 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 DUS3LQ96G46 650 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 PRRG3Q9BZD7 231 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 RNPEPL1Q9HAU8 725 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 ZNF69Q9UC07 566 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 ZNF391Q9UJN7 358 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 RHBDD3Q9Y3P4 386 aa16.34■□□□□ 0.21
TSPAN4-209ENST00000409543 CCDC182A6NF36 153 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 C3orf80F5H4A9 247 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 G3V2T6 193 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 FASP25445 335 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 GNALP38405 381 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 HCCSP53701 268 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 LCN1P1Q5VSP4 162 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 C1orf146Q5VVC0 180 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 KCTD18Q6PI47 426 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 DEGS2Q6QHC5 323 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 RBMS3Q6XE24 437 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 KRT77Q7Z794 578 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 WDR86Q86TI4 376 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 C11orf53Q8IXP5 236 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 ZDHHC22Q8N966 263 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 OR1M1Q8NGA1 313 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 NUDT16L1Q9BRJ7 211 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 PAPOLGQ9BWT3 736 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms