RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 DUX4L2P0CJ85 424 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DUX4L3P0CJ86 424 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DUX4L4P0CJ87 422 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DUX4L5P0CJ88 424 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DUX4L6P0CJ89 424 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DUX4L7P0CJ90 424 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 B4GALT1P15291 398 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 MC2RQ01718 297 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 PPP1R1AQ13522 171 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 ASPHD2Q6ICH7 369 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 ANKRD37Q7Z713 158 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 ADIPOR1Q96A54 375 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF501Q96CX3 271 aaPredicted RBP11.89□□□□□ -0.51
COL6A2-204ENST00000409416 REG4Q9BYZ8 158 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 CNTD2Q9H8S5 307 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 GPR173Q9NS66 373 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DUX4Q9UBX2 424 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 EML6Q6ZMW3 1958 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 NSG1A0A0A6YYJ2 146 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 KRBOX1C9JBD0 128 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 PLPP3O14495 311 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 CRABP1P29762 137 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 IGFBP7Q16270 282 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 FNDC7Q5VTL7 733 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 DNM1P34Q6PK57 102 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 CPEB2Q7Z5Q1 589 aaKnown RBP11.89□□□□□ -0.51
COL6A2-204ENST00000409416 LILRB2Q8N423 598 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 ZSCAN1Q8NBB4 408 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 BVESQ8NE79 360 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 EDAQ92838 391 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
COL6A2-204ENST00000409416 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
COL6A2-204ENST00000409416 FADS1O60427 444 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 CCL3P10147 92 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 FCGR2AP12318 317 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF93P35789 620 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF121P58317 390 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 IGLV3-21P80748 117 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ACY1Q03154 408 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 TMEM88Q6PEY1 159 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 SLC25A28Q96A46 364 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 LRRC46Q96FV0 321 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 CST11Q9H112 138 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 NCOR2Q9Y618 2525 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 A0A1W2PPC1 479 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 LILRA5A6NI73 299 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 STK17BO94768 372 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 TXNDC12O95881 172 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 AMY2BP19961 511 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 OR3A4PP47883 348 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 WIPI1Q5MNZ9 446 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 PAQR8Q8TEZ7 354 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 SLC6A15Q9H2J7 730 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ESRP2Q9H6T0 727 aaKnown RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 A0A0B4J2A0 478 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 OR14I1A6ND48 311 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ALG1L2C9J202 215 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ASCL1P50553 236 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 CSNK2A1P68400 391 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ARHGEF39Q8N4T4 335 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 OR5M9Q8NGP3 310 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF837Q96EG3 531 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF385AQ96PM9 386 aaKnown RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ADAM19Q9H013 955 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF275Q9NSD4 429 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-204ENST00000409416 MBD2Q9UBB5 411 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 SHPKQ9UHJ6 478 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 VSIG4Q9Y279 399 aa11.88□□□□□ -0.51
COL6A2-204ENST00000409416 TRBV23-1A0A0A0MS06 115 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 TEX13DA0A0J9YY54 714 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 HMSDA8MTL9 139 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CXCL13O43927 109 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CSTBP04080 98 aaKnown RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 ERCC1P07992 297 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 GDF1P27539 372 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 EPHA4P54764 986 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 TAF9Q16594 264 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 FIP1L1Q6UN15 594 aaKnown RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 ADAD2Q8NCV1 583 aaKnown RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 TMEM104Q8NE00 496 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 C2CD4CQ8TF44 421 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF285Q96NJ3 590 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 ULBP2Q9BZM5 246 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 WDR13Q9H1Z4 485 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 C1orf198Q9H425 327 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms