RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ACOD1A6NK06 481 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 SULT1C4O75897 302 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 CFL1P23528 166 aaKnown RBP16.86■□□□□ 0.29
SNCA-203ENST00000394986 RAB40BQ12829 278 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 OR8G1Q15617 311 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 OR8B8Q15620 311 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 BCL2L15Q5TBC7 163 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 FAM220AQ7Z4H9 259 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 RORBQ92753 470 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 GPR84Q9NQS5 396 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 MRPS18AQ9NVS2 196 aaKnown RBP16.86■□□□□ 0.29
SNCA-203ENST00000394986 MRPL15Q9P015 296 aaKnown RBP16.86■□□□□ 0.29
SNCA-203ENST00000394986 IL19Q9UHD0 177 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 PCDHGB1Q9Y5G3 927 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 A0A0U1RQV5 110 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 PPIHO43447 177 aaKnown RBP16.85■□□□□ 0.29
SNCA-203ENST00000394986 FAM20BO75063 409 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 FADS2O95864 444 aaKnown RBP16.85■□□□□ 0.29
SNCA-203ENST00000394986 IGHA1P01876 353 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 OR12D2P58182 307 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 ODF4Q2M2E3 257 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 CDONQ4KMG0 1287 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 IZUMO2Q6UXV1 221 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 RNF166Q96A37 237 aaPredicted RBP16.85■□□□□ 0.29
SNCA-203ENST00000394986 FAM71F1Q96KD3 344 aaPredicted RBP16.85■□□□□ 0.29
SNCA-203ENST00000394986 ALG8Q9BVK2 526 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 NARFLQ9H6Q4 476 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 MOB1AQ9H8S9 216 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 RHBDD3Q9Y3P4 386 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 SNX5Q9Y5X3 404 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 HSPE1-MOB4S4R3N1 261 aa16.85■□□□□ 0.29
SNCA-203ENST00000394986 ANKRD30BLA7E2S9 258 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 H0YJX3 145 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 J3QLW9 94 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 IGLV3-1P01715 115 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 FOSL1P15407 271 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 ZNF19P17023 458 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
SNCA-203ENST00000394986 DDOSTP39656 456 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 GPR6P46095 362 aaPredicted RBP16.84■□□□□ 0.29
SNCA-203ENST00000394986 MAB21L1Q13394 359 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 HFEQ30201 348 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 KLHL22Q53GT1 634 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 AVPI1Q5T686 147 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 PRAMEF6Q5VXH4 476 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 THAP5Q7Z6K1 395 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 CATSPERDQ86XM0 798 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 ELMOD2Q8IZ81 293 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 ZNF420Q8TAQ5 688 aaPredicted RBP16.84■□□□□ 0.29
SNCA-203ENST00000394986 C4orf36Q96KX1 117 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 ZNF649Q9BS31 505 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 VCX3BQ9H321 246 aa16.84■□□□□ 0.29
SNCA-203ENST00000394986 LRP5LA4QPB2 252 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 H3BSH0 61 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 P2RY10O00398 339 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 WNT9BO14905 357 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 XPNPEP2O43895 674 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 TNFRSF1AP19438 455 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 SRP9P49458 86 aaKnown RBP16.83■□□□□ 0.28
SNCA-203ENST00000394986 WDR38Q5JTN6 314 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 PRSS35Q8N3Z0 413 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 FBLIM1Q8WUP2 373 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 PAPOLGQ9BWT3 736 aaKnown RBP16.83■□□□□ 0.28
SNCA-203ENST00000394986 ISG20L2Q9H9L3 353 aaKnown RBP16.83■□□□□ 0.28
SNCA-203ENST00000394986 ERVK13-1Q9NX77 482 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 ZNF391Q9UJN7 358 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 PPP1R3CQ9UQK1 317 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 ZANQ9Y493 2812 aa16.83■□□□□ 0.28
SNCA-203ENST00000394986 CHD3Q12873 2000 aaKnown RBP16.82■□□□□ 0.28
SNCA-203ENST00000394986 CD200P41217 278 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 KIR3DL2P43630 455 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 TMEM33P57088 247 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 MVKQ03426 396 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 LOXL1Q08397 574 aaPredicted RBP16.82■□□□□ 0.28
SNCA-203ENST00000394986 GALEQ14376 348 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 MOGAT3Q86VF5 341 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 ZNF540Q8NDQ6 660 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 SLC22A4Q9H015 551 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 GCM1Q9NP62 436 aa16.82■□□□□ 0.28
SNCA-203ENST00000394986 FGF20Q9NP95 211 aaPredicted RBP16.82■□□□□ 0.28
SNCA-203ENST00000394986 A0A1B0GTI1 187 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 CLDN25C9JDP6 229 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 GMDSO60547 372 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 LIMS3P0CW19 117 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 LIMS4P0CW20 117 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 IL2RGP31785 369 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 ACTA2P62736 377 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 ACTG2P63267 376 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 KRTAP1-1Q07627 177 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 MPPED2Q15777 294 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 Q71RC1 249 aaPredicted RBP16.81■□□□□ 0.28
SNCA-203ENST00000394986 CSNK2A3Q8NEV1 391 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 GGHQ92820 318 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 PELI1Q96FA3 418 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 INPP5EQ9NRR6 644 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 TMEM106BQ9NUM4 274 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 UFSP2Q9NUQ7 469 aa16.81■□□□□ 0.28
SNCA-203ENST00000394986 LOC100289279A0A1B0GTE1 492 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 ZNF850A8MQ14 1090 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 LY6G6DO95868 133 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms