RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 C9J4A7 227 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 KIR2DS3K7RE56 304 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ZNF354AO60765 605 aaPredicted RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 FSTP19883 344 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 CXCR1P25024 350 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 MRPS21P82921 87 aaKnown RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 EIF2B1Q14232 305 aaKnown RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 KIR2DS5Q14953 304 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ELOA3BQ3SY89 546 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ALG10BQ5I7T1 473 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 SLC22A25Q6T423 547 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ELOA3Q8NG57 546 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 CD300LFQ8TDQ1 290 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 PACRGQ96M98 296 aaPredicted RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 CAPN10Q9HC96 672 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 LUZP4Q9P127 313 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 AMDHD2Q9Y303 409 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 SEC11BP0C7V7 166 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 C21orf62-AS1Q17RA5 79 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 TSEN15Q8WW01 171 aaKnown RBP16.8■□□□□ 0.28
HOXC6-202ENST00000394331 LMF1Q96S06 567 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 CNTNAP3Q9BZ76 1288 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 ACTR3CQ9C0K3 210 aaPredicted RBP16.8■□□□□ 0.28
HOXC6-202ENST00000394331 TMEM269A0A1B0GVZ9 245 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 SMCO3A2RU48 225 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 ACAA2P42765 397 aaKnown RBP16.8■□□□□ 0.28
HOXC6-202ENST00000394331 PSG6Q00889 435 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 GAGE1Q13065 139 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 ZNF260Q3ZCT1 412 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 ZNF550Q7Z398 422 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 TAF8Q7Z7C8 310 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 LSRQ86X29 649 aaPredicted RBP16.8■□□□□ 0.28
HOXC6-202ENST00000394331 DTWD2Q8NBA8 298 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 PTCHD1Q96NR3 888 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 NUDT9Q9BW91 350 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 DNAJB12Q9NXW2 375 aaKnown RBP16.8■□□□□ 0.28
HOXC6-202ENST00000394331 MEMO1Q9Y316 297 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 STRAPQ9Y3F4 350 aaKnown RBP16.8■□□□□ 0.28
HOXC6-202ENST00000394331 DRD1P21728 446 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 KIR3DL2P43630 455 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 FJX1Q86VR8 437 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 BHLHE23Q8NDY6 225 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 ROBO4Q8WZ75 1007 aa16.8■□□□□ 0.28
HOXC6-202ENST00000394331 TMEM235A6NFC5 223 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 FABP4P15090 132 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 RPL4P36578 427 aaKnown RBP16.79■□□□□ 0.28
HOXC6-202ENST00000394331 RAB32Q13637 225 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 ASPHD2Q6ICH7 369 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 ULK3Q6PHR2 472 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 HSD17B11Q8NBQ5 300 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 Q8WTZ3 238 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 EML5Q05BV3 1969 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 EMDP50402 254 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 GFI1BQ5VTD9 330 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 DGAT2L6Q6ZPD8 337 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 TRAPPC6BQ86SZ2 158 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 OR51F2Q8NH61 342 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 SLC37A2Q8TED4 501 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 DDA1Q9BW61 102 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 STARD5Q9NSY2 213 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 TMEM14AQ9Y6G1 99 aa16.79■□□□□ 0.28
HOXC6-202ENST00000394331 F5P12259 2224 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 HNRNPKP61978 463 aaKnown RBP eCLIP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 RPS4XP62701 263 aaKnown RBP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 AKR1C8PQ5T2L2 129 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 ARMC6Q6NXE6 501 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 ARSGQ96EG1 525 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 A0A1B0GTH9 108 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 SNRPCP09234 159 aaKnown RBP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 IGFBP3P17936 291 aaPredicted RBP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 CCKBRP32239 447 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 TMEM225Q6GV28 225 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 TTLL10Q6ZVT0 673 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 PEG10Q86TG7 708 aaKnown RBP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 OR13H1Q8NG92 308 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 RCC1LQ96I51 464 aaKnown RBP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 HIST1H2BLQ99880 126 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 SLC25A31Q9H0C2 315 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 MKKSQ9NPJ1 570 aaPredicted RBP16.78■□□□□ 0.28
HOXC6-202ENST00000394331 MMP24Q9Y5R2 645 aa16.78■□□□□ 0.28
HOXC6-202ENST00000394331 MEGF11A6BM72 1044 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 FBXO45P0C2W1 286 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 HRH1P35367 487 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 ZNF141Q15928 474 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 HIKESHIQ53FT3 197 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 SOHLH1Q5JUK2 328 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 TMEM31Q5JXX7 168 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 RASD2Q96D21 266 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 NUDT16L1Q9BRJ7 211 aaKnown RBP16.77■□□□□ 0.28
HOXC6-202ENST00000394331 NKX2-4Q9H2Z4 354 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 WDR76Q9H967 626 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 CKLFQ9UBR5 152 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 LAMP5Q9UJQ1 280 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 IKZF2Q9UKS7 526 aa16.77■□□□□ 0.28
HOXC6-202ENST00000394331 IFNA6P05013 189 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 CXCL1P09341 107 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 LINC00614P0C842 121 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms