RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 UNC119Q13432 240 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 TRAPPC6BQ86SZ2 158 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF584Q8IVC4 421 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 TUSC5Q8IXB3 177 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 KCNE4Q8WWG9 221 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 MAFIPQ8WZ33 124 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 WDR89Q96FK6 387 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 C12orf49Q9H741 205 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 GPR173Q9NS66 373 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 AKAP13Q12802 2813 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 NKX2-8O15522 239 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FAM166AQ6J272 317 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FJX1Q86VR8 437 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 TCTE3Q8IZS6 198 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 GABRG1Q8N1C3 465 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 NKAIN3Q8N8D7 197 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FGFBP3Q8TAT2 258 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 PCNPQ8WW12 178 aaKnown RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 SPTSSAQ969W0 71 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FAM173AQ9BQD7 235 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 TTTY12Q9BZ98 90 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 SPRY4Q9C004 299 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 IFT46Q9NQC8 304 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 C1QBP02746 253 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF17P17021 662 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 FSTP19883 344 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 DNASE1P24855 282 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 ARFRP1Q13795 201 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 CCDC92Q53HC0 331 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 TSPO2Q5TGU0 170 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 C1QL2Q7Z5L3 287 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 PAQR4Q8N4S7 273 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 FOXRED1Q96CU9 486 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 FOXB1Q99853 325 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 RAB22AQ9UL26 194 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 CSAG2Q9Y5P2 127 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 MAP1AP78559 2803 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 PTPRQQ9UMZ3 2332 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 NAP1L6A6NFF2 107 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 SOCS1O15524 211 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 ANGPTL7O43827 346 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 LSM6P62312 80 aaKnown RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 PPIAP62937 165 aaKnown RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 CXADRP78310 365 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 DOK3Q7L591 496 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 MCEMP1Q8IX19 187 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 BPIFB2Q8N4F0 458 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 OR11H4Q8NGC9 324 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 OR8H1Q8NGG4 311 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 NABP1Q96AH0 204 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 LYZL4Q96KX0 146 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
TCOF1-203ENST00000394269 TLN1Q9Y490 2541 aaKnown RBP9.77□□□□□ -0.85
TCOF1-203ENST00000394269 LOC102725191A0A1B0GVB3 256 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 C21orf140B9A014 251 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 CREBL2O60519 120 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ICMTO60725 284 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 LPLP06858 475 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM225BP0DP42 221 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 FOXG1P55316 489 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 PMP22Q01453 160 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 RSPO1Q2MKA7 263 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 NKAPLQ5M9Q1 402 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 C20orf196Q8IYI0 205 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM251Q8N6I4 163 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 OR51T1Q8NGJ9 327 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM54Q969K7 222 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ST6GALNAC5Q9BVH7 336 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 PARD6AQ9NPB6 346 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 TAS2R8Q9NYW2 309 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 IGKV1-9A0A0C4DH69 117 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 C7orf66A4D0T2 115 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ANKRD34BA5PLL1 514 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF716A6NP11 495 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 RAB27BO00194 218 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 RGS13O14921 159 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 PMP2P02689 132 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ERCC1P07992 297 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ACTBP60709 375 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ACTG1P63261 375 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 AIMP2Q13155 320 aaKnown RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 RBMS2Q15434 407 aaKnown RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 KISS1Q15726 138 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF239Q16600 458 aaKnown RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 METTL11BQ5VVY1 283 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 CA10Q9NS85 328 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 UBE2QL1A1L167 161 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 NDUFB6O95139 128 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 SYNGR4O95473 234 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 HLA-HP01893 362 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 CD79AP11912 226 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 GABRR1P24046 479 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 MEOX1P50221 254 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF81P51508 661 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 GNG2P59768 71 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 EIF3IQ13347 325 aaKnown RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 TNK1Q13470 666 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 PDCD1Q15116 288 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 UBE2V2Q15819 145 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms