RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 OR1J1Q8NGS3 322 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 TECTBQ96PL2 329 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 SUMF2Q8NBJ7 301 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 WDR54Q9H977 334 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 PLEKHB1Q9UF11 243 aaPredicted RBP14.81□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1W2PPV4 95 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 TERTO14746 1132 aaKnown RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF718Q3SXZ3 478 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 LILRB4Q8NHJ6 448 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 PP6455Q8WZ26 134 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 PLEKHF2Q9H8W4 249 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 SDHAF2Q9NX18 166 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 EIF2S3P41091 472 aaKnown RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 MAGEB1P43366 347 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 FABP6P51161 128 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 AGFG1P52594 562 aaKnown RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 CLINT1Q14677 625 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 CDC20BQ86Y33 519 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 TMEM217Q8N7C4 229 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 CYSLTR2Q9NS75 346 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 TAS2R5Q9NYW4 299 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 PPP1R3CQ9UQK1 317 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 ATG2BQ96BY7 2078 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 OR4C16Q8NGL9 310 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 TCTEX1D2Q8WW35 142 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 CMTM3Q96MX0 182 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 DDOQ99489 341 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 KCNJ16Q9NPI9 418 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 PRELID3BQ9Y3B1 194 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1W2PR80 420 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 OR5H15A6NDH6 313 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 F2RL1P55085 397 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 ZXDCQ2QGD7 858 aaPredicted RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 RPS10P5Q9NQ39 176 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 AQP8O94778 261 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 C1QBP02746 253 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 BGLAPP02818 100 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 GSTP1P09211 210 aaKnown RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 CCL3P10147 92 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 BAXQ07812 192 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 SLC25A45Q8N413 288 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 SCARF2Q96GP6 870 aaPredicted RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 HAO2Q9NYQ3 351 aa14.8□□□□□ -0.04
SCN3B-202ENST00000392770 MRM2Q9UI43 246 aaKnown RBP14.8□□□□□ -0.04
SCN3B-202ENST00000392770 NME2P22392 152 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 AADACP22760 399 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 LUMP51884 338 aaPredicted RBP14.79□□□□□ -0.04
SCN3B-202ENST00000392770 DRAM2Q6UX65 266 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 CPEB3Q8NE35 698 aaKnown RBP14.79□□□□□ -0.04
SCN3B-202ENST00000392770 OR6X1Q8NH79 312 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 SARGQ9BW04 601 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 GFOD1Q9NXC2 390 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 KIF25Q9UIL4 384 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 RAB27BO00194 218 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 ANGPTL7O43827 346 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF32P17041 273 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 MVDP53602 400 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 BAMBIQ13145 260 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 RGS7BPQ6MZT1 257 aaPredicted RBP14.79□□□□□ -0.04
SCN3B-202ENST00000392770 GCNT2Q8N0V5 402 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 TMEM229BQ8NBD8 167 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 TMEM100Q9NV29 134 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 TRAPPC4Q9Y296 219 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 C21orf140B9A014 251 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 C17orf112F2Z3M2 114 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 OR4E1P0C645 316 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 GPA33Q99795 319 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 HIPK2Q9H2X6 1198 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 SLC23A1Q9UHI7 598 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 hCG_1809904A0A1W2PP81 198 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1W2PPE2 198 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1W2PR64 198 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1W2PRV1 198 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 SERPINF1P36955 418 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 HBG1P69891 147 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 HBG2P69892 147 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 SSBP1Q04837 148 aaKnown RBP14.79□□□□□ -0.04
SCN3B-202ENST00000392770 ATPAF1Q5TC12 328 aaPredicted RBP14.79□□□□□ -0.04
SCN3B-202ENST00000392770 TMEM200AQ86VY9 491 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 ARHGEF39Q8N4T4 335 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 CNTNAP3Q9BZ76 1288 aa14.79□□□□□ -0.04
SCN3B-202ENST00000392770 FAM212BQ9NTI7 297 aaPredicted RBP14.79□□□□□ -0.04
SCN3B-202ENST00000392770 OR2M5A3KFT3 312 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 ACAA2P42765 397 aaKnown RBP14.78□□□□□ -0.04
SCN3B-202ENST00000392770 MARCH1Q8TCQ1 289 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1W2PPH5 198 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 OIP5O43482 229 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 DHRS3O75911 302 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 IFNA10P01566 189 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 PI3P19957 117 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 TBPP20226 339 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 DUSP1P28562 367 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 RAB5BP61020 215 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 DMWDQ09019 674 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 PNLIPRP3Q17RR3 467 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 CREB3L2Q70SY1 520 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 OR1S2Q8NGQ3 325 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 RAB33BQ9H082 229 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 CSAG2Q9Y5P2 127 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF674Q2M3X9 581 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms